RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 FAM171BQ6P995 826 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 VSTM1Q6UX27 236 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 LIMS2Q7Z4I7 341 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 ADGRF2Q8IZF7 708 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 KIAA1958Q8N8K9 716 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 IQUBQ8NA54 791 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 LINC00301Q8NCQ3 95 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 USP13Q92995 863 aaPredicted RBP12.7□□□□□ -0.38
SPARC-206ENST00000524277 LOXL4Q96JB6 756 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 PKMYT1Q99640 499 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 PANK2Q9BZ23 570 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 IKZF4Q9H2S9 585 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 MAGEF1Q9HAY2 307 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 PDE11AQ9HCR9 933 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 RBM12Q9NTZ6 932 aaKnown RBP12.7□□□□□ -0.38
SPARC-206ENST00000524277 TMLHEQ9NVH6 421 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 KBTBD4Q9NVX7 518 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 CDH9Q9ULB4 789 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 TSC2P49815 1807 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 DNAH14Q0VDD8 3507 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 TCHHQ07283 1943 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 TRAV19A0A0A6YYK7 116 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 GOLGA8IPA6NC78 632 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 GOLGA8JA6NMD2 632 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 CHURC1-FNTBB4DL54 471 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 TULP1O00294 542 aaPredicted RBP12.69□□□□□ -0.38
SPARC-206ENST00000524277 SPTLC2O15270 562 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 HRO43593 1189 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 AKAP3O75969 853 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 TCF3P15923 654 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 CYP2F1P24903 491 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 PPP3CCP48454 512 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 FNTBP49356 437 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 ATXN1P54253 815 aaKnown RBP12.69□□□□□ -0.38
SPARC-206ENST00000524277 WNT7BP56706 349 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 TNK2Q07912 1038 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 CSRP2Q16527 193 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 SOWAHAQ2M3V2 549 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 TXNDC8Q6A555 127 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 FAM173BQ6P4H8 233 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 CEP68Q76N32 757 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.69□□□□□ -0.38
SPARC-206ENST00000524277 WDR49Q8IV35 697 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 CPA6Q8N4T0 437 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 CAMKK1Q8N5S9 505 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 ZSWIM2Q8NEG5 633 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 TTC8Q8TAM2 541 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 ZNF507Q8TCN5 953 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 NETO1Q8TDF5 533 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 NOC3LQ8WTT2 800 aaKnown RBP12.69□□□□□ -0.38
SPARC-206ENST00000524277 HPDLQ96IR7 371 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 SPATA17Q96L03 361 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 MTMR12Q9C0I1 747 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 PCIF1Q9H4Z3 704 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 CGNQ9P2M7 1197 aaKnown RBP12.69□□□□□ -0.38
SPARC-206ENST00000524277 MAGEC2Q9UBF1 373 aaPredicted RBP12.69□□□□□ -0.38
SPARC-206ENST00000524277 SIX4Q9UIU6 781 aa12.69□□□□□ -0.38
SPARC-206ENST00000524277 UBE4BO95155 1302 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 A0A087X0B3 334 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 K7ELQ4 463 aaPredicted RBP12.68□□□□□ -0.38
SPARC-206ENST00000524277 CUTAO60888 179 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 YEATS4O95619 227 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 WARSP23381 471 aaKnown RBP12.68□□□□□ -0.38
SPARC-206ENST00000524277 MTF1Q14872 753 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 DDR2Q16832 855 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 WDR44Q5JSH3 913 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 Q6ZS52 159 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 PDILTQ8N807 584 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 OSCP1Q8WVF1 389 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 ATP2A3Q93084 1043 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 FNBP1Q96RU3 617 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 TRIM9Q9C026 710 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 SMG9Q9H0W8 520 aaKnown RBP12.68□□□□□ -0.38
SPARC-206ENST00000524277 EBF3Q9H4W6 596 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 HPS4Q9NQG7 708 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 HSPBP1Q9NZL4 362 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 SLC8A2Q9UPR5 921 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 CCL26Q9Y258 94 aa12.68□□□□□ -0.38
SPARC-206ENST00000524277 NCOR2Q9Y618 2525 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 MED19A0JLT2 244 aaPredicted RBP12.67□□□□□ -0.38
SPARC-206ENST00000524277 TRIM66O15016 1216 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 TACC1O75410 805 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 CKMP06732 381 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 ACAT1P24752 427 aaKnown RBP12.67□□□□□ -0.38
SPARC-206ENST00000524277 ANXA13P27216 316 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 GPR15P49685 360 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 ASIC1P78348 528 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 SPEM2Q0P670 501 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 E2F4Q16254 413 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 HS2ST1Q7LGA3 356 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 CACNA2D4Q7Z3S7 1137 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 OSTM1Q86WC4 334 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 SCN4BQ8IWT1 228 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 DDX1Q92499 740 aaKnown RBP12.67□□□□□ -0.38
SPARC-206ENST00000524277 P2RY13Q9BPV8 354 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 C7orf25Q9BPX7 421 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 SYT15Q9BQS2 421 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 FGFBP2Q9BYJ0 223 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 ECT2Q9H8V3 914 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms