RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 BMPR1AP36894 532 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 CPT1AP50416 773 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 TUBB3Q13509 450 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 CYP2A13Q16696 494 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 SPDYAQ5MJ70 313 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 ARHGAP40Q5TG30 622 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 RRAGBQ5VZM2 374 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 ICE2Q659A1 982 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 B3GNTL1Q67FW5 361 aaPredicted RBP4.67□□□□□ -1.66
SKP1-212ENST00000523966 SP5Q6BEB4 398 aaPredicted RBP4.67□□□□□ -1.66
SKP1-212ENST00000523966 CATSPERGQ6ZRH7 1159 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 ADGRG5Q8IZF4 528 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 FAM9AQ8IZU1 332 aaPredicted RBP4.67□□□□□ -1.66
SKP1-212ENST00000523966 RNF152Q8N8N0 203 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 ZNF527Q8NB42 609 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 IL17DQ8TAD2 202 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 POF1BQ8WVV4 589 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 HAS1Q92839 578 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 TRIM63Q969Q1 353 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 PPP2R3CQ969Q6 453 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 TPSD1Q9BZJ3 242 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 ZCWPW1Q9H0M4 648 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 DHX36Q9H2U1 1008 aaKnown RBP4.67□□□□□ -1.66
SKP1-212ENST00000523966 SMOC2Q9H3U7 446 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 ZNF703Q9H7S9 590 aaPredicted RBP4.67□□□□□ -1.66
SKP1-212ENST00000523966 INTS13Q9NVM9 706 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 TBCCD1Q9NVR7 557 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 MRPS18AQ9NVS2 196 aaKnown RBP4.67□□□□□ -1.66
SKP1-212ENST00000523966 CDC23Q9UJX2 597 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 MAN2B2Q9Y2E5 1009 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 REXO2Q9Y3B8 237 aaKnown RBP4.67□□□□□ -1.66
SKP1-212ENST00000523966 hCG_1642624A0A1W2PR95 340 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 CCDC78A2IDD5 438 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 CLCA1A8K7I4 914 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 H7C4K7 107 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 DCLK1O15075 740 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 TCEA3O75764 348 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 PIAS2O75928 621 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 ELANEP08246 267 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 ZNF20P17024 532 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 PTDSS1P48651 473 aaKnown RBP4.66□□□□□ -1.66
SKP1-212ENST00000523966 VAV2P52735 878 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 ITGA8P53708 1063 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 ADAM17P78536 824 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 FAM189BP81408 668 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 HTRA4P83105 476 aaPredicted RBP4.66□□□□□ -1.66
SKP1-212ENST00000523966 MC2RQ01718 297 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 ICA1Q05084 483 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 BOP1Q14137 746 aaKnown RBP4.66□□□□□ -1.66
SKP1-212ENST00000523966 GEN1Q17RS7 908 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 BEAN1Q3B7T3 259 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 RBM20Q5T481 1227 aaKnown RBP4.66□□□□□ -1.66
SKP1-212ENST00000523966 MZT2AQ6P582 158 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 ZDHHC24Q6UX98 284 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 RNF207Q6ZRF8 634 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 LRRC55Q6ZSA7 311 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 SLC15A3Q8IY34 581 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 B3GALNT2Q8NCR0 500 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 BPIFB1Q8TDL5 484 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 MUL1Q969V5 352 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 PTCD3Q96EY7 689 aaKnown RBP4.66□□□□□ -1.66
SKP1-212ENST00000523966 MYEOVQ96EZ4 313 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 TMEM41AQ96HV5 264 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 LRIG1Q96JA1 1093 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 SNX27Q96L92 541 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 GPR20Q99678 358 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 WDR12Q9GZL7 423 aaKnown RBP4.66□□□□□ -1.66
SKP1-212ENST00000523966 FAM83DQ9H4H8 585 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 NRDE2Q9H7Z3 1164 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 GJB4Q9NTQ9 266 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 TMEM74BQ9NUR3 256 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 FZD1Q9UP38 647 aa4.66□□□□□ -1.66
SKP1-212ENST00000523966 UNC119BA6NIH7 251 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 hCG_1984214I3L0E3 225 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 FFAR2O15552 330 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 COQ9O75208 318 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 IL1R1P14778 569 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 PPIFP30405 207 aaKnown RBP4.65□□□□□ -1.67
SKP1-212ENST00000523966 HSPA7P48741 367 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 DGKEP52429 567 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 ZNF134P52741 427 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 TRIM14Q14142 442 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 KRT72Q14CN4 511 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 R3HDM1Q15032 1099 aaKnown RBP4.65□□□□□ -1.67
SKP1-212ENST00000523966 ELF2Q15723 593 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 MPEG1Q2M385 716 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 SLC35G1Q2M3R5 365 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 LY6G5CQ5SRR4 150 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 ANO1Q5XXA6 986 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 PLAG1Q6DJT9 500 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 RGS7BPQ6MZT1 257 aaPredicted RBP4.65□□□□□ -1.67
SKP1-212ENST00000523966 GGT6Q6P531 493 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 KCNV1Q6PIU1 500 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 USP17L6PQ6QN14 398 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 PRRT2Q7Z6L0 340 aaPredicted RBP4.65□□□□□ -1.67
SKP1-212ENST00000523966 ZNF280BQ86YH2 543 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.65□□□□□ -1.67
SKP1-212ENST00000523966 Q8NA96 180 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 FAM136AQ96C01 138 aa4.65□□□□□ -1.67
SKP1-212ENST00000523966 OSBPL9Q96SU4 736 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms