RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 C1orf228Q6PIY5 440 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 ADGRF2Q8IZF7 708 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 OR5B17Q8NGF7 314 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 CACTINQ8WUQ7 758 aaKnown RBP16.57■□□□□ 0.24
MRPS28-209ENST00000522987 CNTNAP3BQ96NU0 1288 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 FAM83CQ9BQN1 747 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 CNTNAP3Q9BZ76 1288 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 PCDHB13Q9Y5F0 798 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 NUP205Q92621 2012 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 THADAQ6YHU6 1953 aa16.57■□□□□ 0.24
MRPS28-209ENST00000522987 RNF40O75150 1001 aa16.56■□□□□ 0.24
MRPS28-209ENST00000522987 CSH1P0DML2 217 aa16.56■□□□□ 0.24
MRPS28-209ENST00000522987 CSH2P0DML3 217 aa16.56■□□□□ 0.24
MRPS28-209ENST00000522987 PDCP20941 246 aa16.56■□□□□ 0.24
MRPS28-209ENST00000522987 GARTP22102 1010 aa16.56■□□□□ 0.24
MRPS28-209ENST00000522987 SMARCB1Q12824 385 aa16.56■□□□□ 0.24
MRPS28-209ENST00000522987 SF3A2Q15428 464 aaKnown RBP16.56■□□□□ 0.24
MRPS28-209ENST00000522987 NFE2Q16621 373 aaPredicted RBP16.56■□□□□ 0.24
MRPS28-209ENST00000522987 FOXD4L5Q5VV16 416 aaPredicted RBP16.56■□□□□ 0.24
MRPS28-209ENST00000522987 CC2D1AQ6P1N0 951 aaPredicted RBP16.56■□□□□ 0.24
MRPS28-209ENST00000522987 CCDC73Q6ZRK6 1079 aa16.56■□□□□ 0.24
MRPS28-209ENST00000522987 PRR23CQ6ZRP0 262 aa16.56■□□□□ 0.24
MRPS28-209ENST00000522987 NT5DC4Q86YG4 428 aa16.56■□□□□ 0.24
MRPS28-209ENST00000522987 SPATA2LQ8IUW3 424 aaPredicted RBP16.56■□□□□ 0.24
MRPS28-209ENST00000522987 CXorf38Q8TB03 319 aa16.56■□□□□ 0.24
MRPS28-209ENST00000522987 FOXD4L4Q8WXT5 416 aaPredicted RBP16.56■□□□□ 0.24
MRPS28-209ENST00000522987 SMOC1Q9H4F8 434 aa16.56■□□□□ 0.24
MRPS28-209ENST00000522987 WNT6Q9Y6F9 365 aa16.56■□□□□ 0.24
MRPS28-209ENST00000522987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.55■□□□□ 0.24
MRPS28-209ENST00000522987 C2orf78A6NCI8 922 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 LDHAP00338 332 aaKnown RBP16.55■□□□□ 0.24
MRPS28-209ENST00000522987 CKMP06732 381 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 PDGFRBP09619 1106 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 WEE1P30291 646 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 RPL10AP62906 217 aaKnown RBP16.55■□□□□ 0.24
MRPS28-209ENST00000522987 RBP5P82980 135 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 GRSF1Q12849 480 aaKnown RBP eCLIP16.55■□□□□ 0.24
MRPS28-209ENST00000522987 PSMD2Q13200 908 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 SOWAHAQ2M3V2 549 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 TMEM196Q5HYL7 178 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 MON1AQ86VX9 555 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 WDR5BQ86VZ2 330 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 CBWD2Q8IUF1 395 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 GPD1LQ8N335 351 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 ARL14EPQ8N8R7 260 aaPredicted RBP16.55■□□□□ 0.24
MRPS28-209ENST00000522987 RDH13Q8NBN7 331 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 HHIPQ96QV1 700 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 PKMYT1Q99640 499 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 ACBD6Q9BR61 282 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 RTKNQ9BST9 563 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 ARRDC1-AS1Q9H2J1 176 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 OLFML3Q9NRN5 406 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 ITGA11Q9UKX5 1188 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 MTMR6Q9Y217 621 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 ABCA7Q8IZY2 2146 aa16.55■□□□□ 0.24
MRPS28-209ENST00000522987 ANTXRLA6NF34 631 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 SCAMP3O14828 347 aaKnown RBP16.54■□□□□ 0.24
MRPS28-209ENST00000522987 PAPSS2O95340 614 aaPredicted RBP16.54■□□□□ 0.24
MRPS28-209ENST00000522987 CCDC192P0DO97 292 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 SDHBP21912 280 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 LMO2P25791 158 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 GALK1P51570 392 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 MTF1Q14872 753 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 SLC39A14Q15043 492 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 STK38Q15208 465 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 FOXD4L6Q3SYB3 417 aaPredicted RBP16.54■□□□□ 0.24
MRPS28-209ENST00000522987 FOXD4L3Q6VB84 417 aaPredicted RBP16.54■□□□□ 0.24
MRPS28-209ENST00000522987 KBTBD6Q86V97 674 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 CCDC65Q8IXS2 484 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 LRRC52Q8N7C0 313 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 ANKRD36BP1Q96IX9 119 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 SYT15Q9BQS2 421 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 DUS2Q9NX74 493 aaKnown RBP16.54■□□□□ 0.24
MRPS28-209ENST00000522987 TFIP11Q9UBB9 837 aaKnown RBP16.54■□□□□ 0.24
MRPS28-209ENST00000522987 SLC8A2Q9UPR5 921 aa16.54■□□□□ 0.24
MRPS28-209ENST00000522987 R3HCC1Q9Y3T6 440 aaKnown RBP16.54■□□□□ 0.24
MRPS28-209ENST00000522987 TPRP12270 2363 aaKnown RBP16.53■□□□□ 0.24
MRPS28-209ENST00000522987 TRAV19A0A0A6YYK7 116 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 FRMD3A2A2Y4 597 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 RPP40O75818 363 aaKnown RBP16.53■□□□□ 0.24
MRPS28-209ENST00000522987 NOL4O94818 638 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 TNNC2P02585 160 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 BDNFP23560 247 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 DDX6P26196 483 aaKnown RBP eCLIP16.53■□□□□ 0.24
MRPS28-209ENST00000522987 CASP1P29466 404 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 GJA4P35212 333 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 IFNAR2P48551 515 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 POU5F1Q01860 360 aaKnown RBP16.53■□□□□ 0.24
MRPS28-209ENST00000522987 CYP27A1Q02318 531 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 PPM1JQ5JR12 505 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 TMEM86AQ8N2M4 240 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 RPLP0P6Q8NHW5 317 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 LEO1Q8WVC0 666 aaPredicted RBP16.53■□□□□ 0.24
MRPS28-209ENST00000522987 KBTBD7Q8WVZ9 684 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 MYLPFQ96A32 169 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 DHX58Q96C10 678 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 HPDLQ96IR7 371 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 MMS19Q96T76 1030 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 LINC00597Q9H2U6 94 aa16.53■□□□□ 0.24
MRPS28-209ENST00000522987 KIF9Q9HAQ2 790 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms