RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 GDAP2Q9NXN4 497 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 NCDNQ9UBB6 729 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 CFAP45Q9UL16 551 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 CCL26Q9Y258 94 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 DMXL1Q9Y485 3027 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 GPR179Q6PRD1 2367 aa10.98□□□□□ -0.65
CTNNA1-235ENST00000522730 ARNTLO00327 626 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 TGFB1I1O43294 461 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 EXOC3O60645 756 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 PHACTR2O75167 634 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 CST3P01034 146 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 F11P03951 625 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 CHRNB1P11230 501 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 HMGA1P17096 107 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 PCSK1P29120 753 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 GNL1P36915 607 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 GRIK1P39086 918 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 ID4P47928 161 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 CXCL12P48061 93 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 PDAP1Q13442 181 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 TRPC3Q13507 836 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 PPP2R5DQ14738 602 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 HEATR6Q6AI08 1181 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 TRIM68Q6AZZ1 485 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 CC2D1AQ6P1N0 951 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 TXNDC11Q6PKC3 985 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 UNC13DQ70J99 1090 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 EPM2AIP1Q7L775 607 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 HS2ST1Q7LGA3 356 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 TRAPPC11Q7Z392 1133 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 ZNF687Q8N1G0 1237 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 TOP6BLQ8N6T0 577 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 XXYLT1Q8NBI6 393 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 CXorf38Q8TB03 319 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 SCFD1Q8WVM8 642 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 CYP2S1Q96SQ9 504 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 SNX25Q9H3E2 840 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 AGPAT3Q9NRZ7 376 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 MAGEC2Q9UBF1 373 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 SERTAD1Q9UHV2 236 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 MIA3Q5JRA6 1907 aa10.97□□□□□ -0.65
CTNNA1-235ENST00000522730 TCHHQ07283 1943 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 EIF3DO15371 548 aaKnown RBP eCLIP10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 ABL1P00519 1130 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 BDNFP23560 247 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 CTHP32929 405 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 SATB1Q01826 763 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 CYP24A1Q07973 514 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 LRRC32Q14392 662 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 ITPRIPL2Q3MIP1 535 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 RESP18Q5W5W9 173 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 TMEM150AQ86TG1 271 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 MON1AQ86VX9 555 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 RALGPS2Q86X27 583 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 WDR49Q8IV35 697 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 SUMF1Q8NBK3 374 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 OR6B3Q8NGW1 331 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 USP13Q92995 863 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 MYLPFQ96A32 169 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 CHAMP1Q96JM3 812 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 SYT15Q9BQS2 421 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 MRPL45Q9BRJ2 306 aaKnown RBP10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 CHRDQ9H2X0 955 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 EBF3Q9H4W6 596 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 TDP1Q9NUW8 608 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 NXF1Q9UBU9 619 aaKnown RBP10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 RCOR1Q9UKL0 485 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 PCDHGA2Q9Y5H1 932 aa10.96□□□□□ -0.65
CTNNA1-235ENST00000522730 A0A1B0GVL5 298 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 CHURC1-FNTBB4DL54 471 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 GABRDO14764 452 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 CKMP06732 381 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 PDIA4P13667 645 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 ARSAP15289 507 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 ANXA13P27216 316 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 FNTBP49356 437 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 CASP4P49662 377 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 PSEN1P49768 467 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 CCR3P51677 355 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 NRLP54845 237 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 TNNC1P63316 161 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 BIRC3Q13489 604 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 RUNX3Q13761 415 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 GAS6Q14393 721 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 PSMD6Q15008 389 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 WDR72Q3MJ13 1102 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 MDH1BQ5I0G3 518 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 C4orf50Q6ZRC1 276 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 PRR23BQ6ZRT6 265 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 Q6ZS52 159 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 DPH6Q7L8W6 267 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 KBTBD7Q8WVZ9 684 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 ZNF516Q92618 1163 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 SECISBP2LQ93073 1101 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 ELMO3Q96BJ8 720 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 PAGE5Q96GU1 130 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 PKMYT1Q99640 499 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 CGRRF1Q99675 332 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 MAGEF1Q9HAY2 307 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 ABCB6Q9NP58 842 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms