RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 MTF2Q9Y483 593 aaPredicted RBP18.25■□□□□ 0.51
SQLE-205ENST00000521232 SOBPA7XYQ1 873 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 ARNTLO00327 626 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 CHADO15335 359 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 CALUO43852 315 aaPredicted RBP18.24■□□□□ 0.51
SQLE-205ENST00000521232 LRRN2O75325 713 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 C4BPAP04003 597 aaKnown RBP18.24■□□□□ 0.51
SQLE-205ENST00000521232 PDGFRBP09619 1106 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 GNL1P36915 607 aaPredicted RBP18.24■□□□□ 0.51
SQLE-205ENST00000521232 NBL1P41271 181 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 MAGEA11P43364 429 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 MLLT6P55198 1093 aaPredicted RBP18.24■□□□□ 0.51
SQLE-205ENST00000521232 NLRP12P59046 1061 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 MYL6P60660 151 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 CYP4F8P98187 520 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 MAPRE1Q15691 268 aaKnown RBP18.24■□□□□ 0.51
SQLE-205ENST00000521232 NFIL3Q16649 462 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 SDHAF4Q5VUM1 108 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 ZNF852Q6ZMS4 543 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 C4orf50Q6ZRC1 276 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 GPIHBP1Q8IV16 184 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 SYAP1Q96A49 352 aaPredicted RBP18.24■□□□□ 0.51
SQLE-205ENST00000521232 TRMT2BQ96GJ1 504 aaKnown RBP18.24■□□□□ 0.51
SQLE-205ENST00000521232 MYRFLQ96LU7 910 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 LRRC3BQ96PB8 259 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 MRPL45Q9BRJ2 306 aaKnown RBP18.24■□□□□ 0.51
SQLE-205ENST00000521232 CRTAC1Q9NQ79 661 aa18.24■□□□□ 0.51
SQLE-205ENST00000521232 MAGEC2Q9UBF1 373 aaPredicted RBP18.24■□□□□ 0.51
SQLE-205ENST00000521232 RIF1Q5UIP0 2472 aaKnown RBP18.24■□□□□ 0.51
SQLE-205ENST00000521232 MAN2B1O00754 1011 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 PHACTR2O75167 634 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 NOL4O94818 638 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 DDX6P26196 483 aaKnown RBP eCLIP18.23■□□□□ 0.513e-7■■■■■ 30
SQLE-205ENST00000521232 TNNC1P63316 161 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 FZD5Q13467 585 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 UBXN2BQ14CS0 331 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 TDRD10Q5VZ19 366 aaKnown RBP18.23■□□□□ 0.51
SQLE-205ENST00000521232 C1orf210Q8IVY1 113 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 YAF2Q8IY57 180 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 FMR1NBQ8N0W7 255 aaPredicted RBP18.23■□□□□ 0.51
SQLE-205ENST00000521232 GUF1Q8N442 669 aaKnown RBP18.23■□□□□ 0.51
SQLE-205ENST00000521232 MYCBPAPQ8TBZ2 947 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 TMC2Q8TDI7 906 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 CLDN23Q96B33 292 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 SNX25Q9H3E2 840 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 UXTQ9UBK9 157 aaPredicted RBP18.23■□□□□ 0.51
SQLE-205ENST00000521232 MRPS17Q9Y2R5 130 aaKnown RBP18.23■□□□□ 0.51
SQLE-205ENST00000521232 NME7Q9Y5B8 376 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 PTPRDP23468 1912 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 TICRRQ7Z2Z1 1910 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 COL4A2P08572 1712 aa18.23■□□□□ 0.51
SQLE-205ENST00000521232 ZNF638Q14966 1978 aaKnown RBP18.22■□□□□ 0.51
SQLE-205ENST00000521232 GREB1Q4ZG55 1949 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 SLC38A8A6NNN8 435 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 DPYSL4O14531 572 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 IKBKBO14920 756 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 MAPK13O15264 365 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 TARSP26639 723 aaKnown RBP18.22■□□□□ 0.51
SQLE-205ENST00000521232 MAGEA9P43362 315 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 PSMC1P62191 440 aaKnown RBP18.22■□□□□ 0.51
SQLE-205ENST00000521232 DLG4P78352 724 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 VSTM1Q6UX27 236 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 CMTM8Q8IZV2 173 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 ZNF687Q8N1G0 1237 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 STKLD1Q8NE28 680 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 OR6B3Q8NGW1 331 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 MYLPFQ96A32 169 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 CCDC34Q96HJ3 373 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 SPATA17Q96L03 361 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 CEP295NLQ96MC4 621 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 BCO2Q9BYV7 579 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 MAGED2Q9UNF1 606 aaPredicted RBP18.22■□□□□ 0.51
SQLE-205ENST00000521232 FRMD4BQ9Y2L6 1034 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 OBSL1O75147 1896 aa18.22■□□□□ 0.51
SQLE-205ENST00000521232 NCAM2O15394 837 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 VNN1O95497 513 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 PRAMEF12O95522 483 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 RPS9P46781 194 aaKnown RBP18.21■□□□□ 0.51
SQLE-205ENST00000521232 BIRC3Q13489 604 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 NCOA4Q13772 614 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 ZACNQ401N2 412 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 ARHGAP29Q52LW3 1261 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 CEP135Q66GS9 1140 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 MON1AQ86VX9 555 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 SCN4BQ8IWT1 228 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 CELF5Q8N6W0 485 aaKnown RBP18.21■□□□□ 0.51
SQLE-205ENST00000521232 ENGASEQ8NFI3 743 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 BPIFB1Q8TDL5 484 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 MRPS31Q92665 395 aaKnown RBP18.21■□□□□ 0.51
SQLE-205ENST00000521232 PCED1BQ96HM7 432 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 NXF1Q9UBU9 619 aaKnown RBP18.21■□□□□ 0.51
SQLE-205ENST00000521232 MAPK8IP1Q9UQF2 711 aa18.21■□□□□ 0.51
SQLE-205ENST00000521232 PTPRZ1P23471 2315 aaPredicted RBP18.21■□□□□ 0.51
SQLE-205ENST00000521232 GOLGA6L4A6NEF3 574 aa18.2■□□□□ 0.5
SQLE-205ENST00000521232 PTPN1P18031 435 aaKnown RBP18.2■□□□□ 0.5
SQLE-205ENST00000521232 BDNFP23560 247 aa18.2■□□□□ 0.5
SQLE-205ENST00000521232 NR2F2P24468 414 aa18.2■□□□□ 0.5
SQLE-205ENST00000521232 MCCD1P59942 119 aaPredicted RBP18.2■□□□□ 0.5
SQLE-205ENST00000521232 CYP27A1Q02318 531 aa18.2■□□□□ 0.5
SQLE-205ENST00000521232 SGSM1Q2NKQ1 1148 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms