RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 C4orf50Q6ZRC1 276 aa16.96■□□□□ 0.3
CLN8-205ENST00000520991 TMEM150AQ86TG1 271 aa16.96■□□□□ 0.3
CLN8-205ENST00000520991 SCN4BQ8IWT1 228 aa16.96■□□□□ 0.3
CLN8-205ENST00000520991 GRAMD1CQ8IYS0 662 aa16.96■□□□□ 0.3
CLN8-205ENST00000520991 FUBP3Q96I24 572 aaKnown RBP eCLIP16.96■□□□□ 0.3
CLN8-205ENST00000520991 PKMYT1Q99640 499 aa16.96■□□□□ 0.3
CLN8-205ENST00000520991 CGRRF1Q99675 332 aa16.96■□□□□ 0.3
CLN8-205ENST00000520991 SYT15Q9BQS2 421 aa16.96■□□□□ 0.3
CLN8-205ENST00000520991 PRMT8Q9NR22 394 aaPredicted RBP16.96■□□□□ 0.3
CLN8-205ENST00000520991 ZSCAN32Q9NX65 697 aa16.96■□□□□ 0.3
CLN8-205ENST00000520991 GTSE1Q9NYZ3 720 aa16.96■□□□□ 0.3
CLN8-205ENST00000520991 CGNQ9P2M7 1197 aaKnown RBP16.96■□□□□ 0.3
CLN8-205ENST00000520991 RCOR1Q9UKL0 485 aa16.96■□□□□ 0.3
CLN8-205ENST00000520991 FANCMQ8IYD8 2048 aa16.95■□□□□ 0.3
CLN8-205ENST00000520991 SPECC1L-ADORA2AF8WAN1 911 aa16.95■□□□□ 0.3
CLN8-205ENST00000520991 CTHP32929 405 aa16.95■□□□□ 0.3
CLN8-205ENST00000520991 PSMC1P62191 440 aaKnown RBP16.95■□□□□ 0.3
CLN8-205ENST00000520991 KNOP1Q1ED39 458 aaKnown RBP16.95■□□□□ 0.3
CLN8-205ENST00000520991 BMT2Q1RMZ1 405 aa16.95■□□□□ 0.3
CLN8-205ENST00000520991 CFAP221Q4G0U5 840 aa16.95■□□□□ 0.3
CLN8-205ENST00000520991 TXNDC8Q6A555 127 aa16.95■□□□□ 0.3
CLN8-205ENST00000520991 RALGPS2Q86X27 583 aaPredicted RBP16.95■□□□□ 0.3
CLN8-205ENST00000520991 KIF9Q9HAQ2 790 aa16.95■□□□□ 0.3
CLN8-205ENST00000520991 EXOC1Q9NV70 894 aa16.95■□□□□ 0.3
CLN8-205ENST00000520991 SERTAD1Q9UHV2 236 aa16.95■□□□□ 0.3
CLN8-205ENST00000520991 CDH9Q9ULB4 789 aa16.95■□□□□ 0.3
CLN8-205ENST00000520991 F5P12259 2224 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 EXOC3O60645 756 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 ATP2C2O75185 946 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 NOL4O94818 638 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 SLFN14P0C7P3 912 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 CHRNB1P11230 501 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 WARSP23381 471 aaKnown RBP16.94■□□□□ 0.3
CLN8-205ENST00000520991 LMO2P25791 158 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 CCR3P51677 355 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 TNK2Q07912 1038 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 MAPRE1Q15691 268 aaKnown RBP16.94■□□□□ 0.3
CLN8-205ENST00000520991 FAM171BQ6P995 826 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 GOLGA5Q8TBA6 731 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 KBTBD7Q8WVZ9 684 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 RUBCNQ92622 972 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 MYLPFQ96A32 169 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 TRMT2BQ96GJ1 504 aaKnown RBP16.94■□□□□ 0.3
CLN8-205ENST00000520991 FAM126AQ9BYI3 521 aaPredicted RBP16.94■□□□□ 0.3
CLN8-205ENST00000520991 SNX25Q9H3E2 840 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 TRPC7Q9HCX4 862 aa16.94■□□□□ 0.3
CLN8-205ENST00000520991 MAGEC2Q9UBF1 373 aaPredicted RBP16.94■□□□□ 0.3
CLN8-205ENST00000520991 SOBPA7XYQ1 873 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 ACTN4O43707 911 aaKnown RBP16.93■□□□□ 0.3
CLN8-205ENST00000520991 CLSTN1O94985 981 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 PDGFRBP09619 1106 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 MAGEA11P43364 429 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 NRLP54845 237 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 TNNC1P63316 161 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 CYP27A1Q02318 531 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 TRPC3Q13507 836 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 ITPRIPL2Q3MIP1 535 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 CC2D1AQ6P1N0 951 aaPredicted RBP16.93■□□□□ 0.3
CLN8-205ENST00000520991 LIMS2Q7Z4I7 341 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 MON1AQ86VX9 555 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 C12orf56Q8IXR9 622 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 ZBTB44Q8NCP5 570 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 USP13Q92995 863 aaPredicted RBP16.93■□□□□ 0.3
CLN8-205ENST00000520991 PAGE5Q96GU1 130 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 GKN1Q9NS71 199 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 RBM12Q9NTZ6 932 aaKnown RBP16.93■□□□□ 0.3
CLN8-205ENST00000520991 TDP1Q9NUW8 608 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 CCL26Q9Y258 94 aa16.93■□□□□ 0.3
CLN8-205ENST00000520991 GVINP1Q7Z2Y8 2422 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 A0A1B0GVL5 298 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 PHACTR2O75167 634 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 TADA3O75528 432 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 CST3P01034 146 aaPredicted RBP16.92■□□□□ 0.3
CLN8-205ENST00000520991 PFKFB1P16118 471 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 ANXA13P27216 316 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 GRIK1P39086 918 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 KRT85P78386 507 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 PON2Q15165 354 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 WDR72Q3MJ13 1102 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 TXNDC11Q6PKC3 985 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 VSTM1Q6UX27 236 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 MAMSTRQ6ZN01 415 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 FSIP1Q8NA03 581 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 SUMF1Q8NBK3 374 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 TTC16Q8NEE8 873 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 SPATA32Q96LK8 384 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 MYRFLQ96LU7 910 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 MRPL45Q9BRJ2 306 aaKnown RBP16.92■□□□□ 0.3
CLN8-205ENST00000520991 CRTAC1Q9NQ79 661 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 NCDNQ9UBB6 729 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 USP25Q9UHP3 1055 aa16.92■□□□□ 0.3
CLN8-205ENST00000520991 DENND4CQ5VZ89 1909 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 TRAV19A0A0A6YYK7 116 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 TACC1O75410 805 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 CKMP06732 381 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 BDNFP23560 247 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 CMA1P23946 247 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 GNL1P36915 607 aaPredicted RBP16.91■□□□□ 0.3
CLN8-205ENST00000520991 CXCL12P48061 93 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 SATB1Q01826 763 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms