RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 OLIG1Q8TAK6 271 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 FAM212AQ96EL1 285 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 PNMA5Q96PV4 448 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 MSTO1Q9BUK6 570 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 TPSD1Q9BZJ3 242 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 ABCB6Q9NP58 842 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 ODF2LQ9ULJ1 636 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 INVSQ9Y283 1065 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 MSRB2Q9Y3D2 182 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 WNT6Q9Y6F9 365 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 ABCA7Q8IZY2 2146 aa13.31□□□□□ -0.28
TRAPPC9-204ENST00000518723 NPHP3-ACAD11A0A0J9YXS1 232 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 UPK3BL1B0FP48 263 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 UPK3BL2E5RIL1 263 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 PRPF40AO75400 957 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 PLA2G4BP0C869 781 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 GPR15P49685 360 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 HMGN5P82970 282 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 TSPY1Q01534 308 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 POU5F1Q01860 360 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 PSMD2Q13200 908 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 ZRSR1Q15695 479 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 ANO7Q6IWH7 933 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 SLC39A4Q6P5W5 647 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 CCDC83Q8IWF9 413 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 MDGA1Q8NFP4 955 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 SLC32A1Q9H598 525 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 TMLHEQ9NVH6 421 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 DPP3Q9NY33 737 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 MMP17Q9ULZ9 603 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 MAGED2Q9UNF1 606 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 LHX6Q9UPM6 363 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 NUP205Q92621 2012 aa13.3□□□□□ -0.28
TRAPPC9-204ENST00000518723 ASCC3Q8N3C0 2202 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 TRAV19A0A0A6YYK7 116 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 KPNA7A9QM74 516 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 K7EQS6 105 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 TNFRSF10BO14763 440 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 HYAL3O43820 417 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 CKMP06732 381 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 ABCD1P33897 745 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 DHPSP49366 369 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 ZNF131P52739 623 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 RPL10AP62906 217 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 CRY1Q16526 586 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 UAP1L1Q3KQV9 507 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 SV2CQ496J9 727 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 TMEM119Q4V9L6 283 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 TRIM61Q5EBN2 209 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 PIP4P1Q86T03 277 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 STKLD1Q8NE28 680 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 PIGKQ92643 395 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 SLC22A12Q96S37 553 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 PI4K2AQ9BTU6 479 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 GCNT4Q9P109 453 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 LIMCH1Q9UPQ0 1083 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 KIAA1549LQ6ZVL6 1849 aa13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 SMG1Q96Q15 3661 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-204ENST00000518723 FAM221BA6H8Z2 402 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 H0Y626 953 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 K7ENM7 598 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 ALDH1A2O94788 518 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 TRIM16O95361 564 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 NFATC1O95644 943 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 OPRD1P41143 372 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 P2RY2P41231 377 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 DPP6P42658 865 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 ACOT2P49753 483 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 MRPS21P82921 87 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 ATP2C1P98194 919 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 SEMA3BQ13214 749 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 DDR2Q16832 855 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 C2orf27AQ580R0 203 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 SPDYCQ5MJ68 293 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 SDHAF4Q5VUM1 108 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 KIAA1211LQ6NV74 962 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 LPCAT2Q7L5N7 544 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 SYT12Q8IV01 421 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 EFCAB13Q8IY85 973 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 KIAA1958Q8N8K9 716 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 FAM184AQ8NB25 1140 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 SH3RF2Q8TEC5 729 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 ZNF560Q96MR9 790 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 FIZ1Q96SL8 496 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 CYP2S1Q96SQ9 504 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 PKMYT1Q99640 499 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 ACBD6Q9BR61 282 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 REEP2Q9BRK0 252 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 NUSAP1Q9BXS6 441 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 PARVGQ9HBI0 331 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 TRPC7Q9HCX4 862 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 ARHGAP26Q9UNA1 814 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 STYXL1Q9Y6J8 313 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 SCN1AP35498 2009 aa13.28□□□□□ -0.28
TRAPPC9-204ENST00000518723 OBSL1O75147 1896 aa13.27□□□□□ -0.28
TRAPPC9-204ENST00000518723 PCNX2A6NKB5 2137 aa13.27□□□□□ -0.28
TRAPPC9-204ENST00000518723 TAF4O00268 1085 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms