RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DYNC1LI2O43237 492 aaPredicted RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 ADAM20O43506 726 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 KCNQ3O43525 872 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 NRP2O60462 931 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 PPP6R2O75170 966 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 STAM2O75886 525 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 SNRNP70P08621 437 aaKnown RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 SPARCP09486 303 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 PSMA4P25789 261 aaKnown RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 KLRC1P26715 233 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 MAPK3P27361 379 aaPredicted RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 RAD23AP54725 363 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 CSE1LP55060 971 aaKnown RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 NRG3P56975 720 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 NOMO3P69849 1222 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 TEKQ02763 1124 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 MTA1Q13330 715 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 NFE2L1Q14494 772 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 TNIP1Q15025 636 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 SF3B3Q15393 1217 aaKnown RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 ANKDD1AQ495B1 522 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 DCAF12L1Q5VU92 463 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 HLA-DQA1Q5Y7H0 255 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 FAM90A1Q86YD7 464 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 GLB1L2Q8IW92 636 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 CCDC28AQ8IWP9 274 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZFPM1Q8IX07 1006 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 KIAA2013Q8IYS2 634 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 CNTROBQ8N137 903 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 WDTC1Q8N5D0 677 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 SLC15A4Q8N697 577 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 DNAJC5GQ8N7S2 189 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 USP38Q8NB14 1042 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 ARRDC4Q8NCT1 418 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 PIWIL2Q8TC59 973 aaKnown RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 FNIP1Q8TF40 1166 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 EXOC4Q96A65 974 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 FOXB1Q99853 325 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 CITED2Q99967 270 aaPredicted RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 THUMPD3Q9BV44 507 aaKnown RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 TRIM6Q9C030 488 aaPredicted RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZCWPW1Q9H0M4 648 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 DUSP15Q9H1R2 295 aaPredicted RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 VPS16Q9H269 839 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 ACSS3Q9H6R3 686 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 LDAHQ9H6V9 325 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 VEZTQ9HBM0 779 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 G6PC2Q9NQR9 355 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 PCDHB16Q9NRJ7 776 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 HCFC1R1Q9NWW0 138 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 TAS2R10Q9NYW0 307 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 NDUFAF4Q9P032 175 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 C5AR2Q9P296 337 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZC3H7BQ9UGR2 993 aaKnown RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 CNOT7Q9UIV1 285 aaKnown RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 ANAPC5Q9UJX4 755 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 AJAP1Q9UKB5 411 aaPredicted RBP4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 TBC1D30Q9Y2I9 924 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 MED16Q9Y2X0 877 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 DTNAQ9Y4J8 743 aa4.29□□□□□ -1.72
RNU4-60P-201ENST00000517239 A0A0U1RQK1 487 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZNF320A2RRD8 509 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 MBD3L4A6NDZ8 208 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 MBD3L3A6NE82 208 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 DDX39AO00148 427 aaKnown RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 TERTO14746 1132 aaKnown RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 PCDH17O14917 1159 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 HGSO14964 777 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 MUSKO15146 869 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 LEFTY1O75610 366 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 SLC22A3O75751 556 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 PIAS2O75928 621 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 GGPS1O95749 300 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 GLP2RO95838 553 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 SRFP11831 508 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 CKBP12277 381 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 RARGP13631 454 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 EEF2P13639 858 aaKnown RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 C6P13671 934 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 EPHA8P29322 1005 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 PPARGP37231 505 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 BUD31P41223 144 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 PIK3CGP48736 1102 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 PRR20EP86478 221 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 PRR20CP86479 221 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 PRR20DP86480 221 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 PRR20BP86481 221 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 PRR20AP86496 221 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 DDR1Q08345 913 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 CAMK1Q14012 370 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 HABP2Q14520 560 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 SLC29A2Q14542 456 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 TAF7Q15545 349 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZNF805Q5CZA5 627 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 TCP11X2Q5H9J9 407 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 GARNL3Q5VVW2 1013 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 ANO7Q6IWH7 933 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 RINT1Q6NUQ1 792 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 CDPF1Q6NVV7 123 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 TAF2Q6P1X5 1199 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms