RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 SHOC2Q9UQ13 582 aa3.62□□□□□ -1.83
RNU6-1088P-201ENST00000516850 TBC1D30Q9Y2I9 924 aa3.62□□□□□ -1.83
RNU6-1088P-201ENST00000516850 PRRT4C9JH25 899 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 UNC5CO95185 931 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 TUBB4AP04350 444 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 FESP07332 822 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 GRPP07492 148 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 IL6RP08887 468 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 DLDP09622 509 aaKnown RBP3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 CT47B1P0C2W7 299 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 XRCC6P12956 609 aaKnown RBP eCLIP3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ITGB6P18564 788 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 HDCP19113 662 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 IBSPP21815 317 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 CTGFP29279 349 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 LRPAP1P30533 357 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 LIPAP38571 399 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 MMP13P45452 471 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 CLCN2P51788 898 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ZNF134P52741 427 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 LILRA4P59901 499 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 SSBP2P81877 361 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 HOXA4Q00056 320 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 BOP1Q14137 746 aaKnown RBP3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 PLS1Q14651 629 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 CERKLQ49MI3 558 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 MORN5Q5VZ52 161 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 SLC18B1Q6NT16 456 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 NAPRTQ6XQN6 538 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 MAVSQ7Z434 540 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 RP9Q8TA86 221 aaKnown RBP3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 CHMP4CQ96CF2 233 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 REPS1Q96D71 796 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 MVB12AQ96EY5 273 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 FCRL4Q96PJ5 515 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 MAP3K14Q99558 947 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 PCDH12Q9NPG4 1184 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 PCDHA6Q9UN73 950 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 COL4A3BPQ9Y5P4 624 aa3.61□□□□□ -1.83
RNU6-1088P-201ENST00000516850 A1L4Q6 167 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 IKBKBO14920 756 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 LATS1O95835 1130 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 THP07101 528 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 CYP2C9P11712 490 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 PCSK6P29122 969 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 TPTEP56180 551 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 NKX6-1P78426 367 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 GPSM2P81274 684 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 EMC10Q5UCC4 262 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 RGS7BPQ6MZT1 257 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 MIS18BP1Q6P0N0 1132 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 MTHFD1LQ6UB35 978 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 TRIM72Q6ZMU5 477 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 BHLHA9Q7RTU4 235 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 PNLDC1Q8NA58 520 aaKnown RBP3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ABHD11Q8NFV4 315 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ATG4AQ8WYN0 398 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 GLG1Q92896 1179 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 DAZAP1Q96EP5 407 aaKnown RBP3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 GTPBP4Q9BZE4 634 aaKnown RBP3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ZSCAN32Q9NX65 697 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 TFCP2L1Q9NZI6 479 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 XPR1Q9UBH6 696 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 NDRG4Q9ULP0 352 aaKnown RBP3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ADAMTS5Q9UNA0 930 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 BTBD3Q9Y2F9 522 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ANKRD6Q9Y2G4 727 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 TMX2Q9Y320 296 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ZNF521Q96K83 1311 aa3.6□□□□□ -1.83
RNU6-1088P-201ENST00000516850 TISP43B9A030 160 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 UBE2Q2LH0YL09 131 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ZNF213O14771 459 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 DCLK1O15075 740 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 IGKV2-30P06310 120 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 VIPR2P41587 438 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 PDE6CP51160 858 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 KRT17Q04695 432 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 KLF9Q13886 244 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ETFDHQ16134 617 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 MGAT5BQ3V5L5 792 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 CEP78Q5JTW2 689 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 PXDC1Q5TGL8 231 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 C11orf87Q6NUJ2 197 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 SERPINA13PQ6UXR4 307 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 CATSPERGQ6ZRH7 1159 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 CNGA4Q8IV77 575 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 SLC15A3Q8IY34 581 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 GRAMD1CQ8IYS0 662 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 Q8N9P0 234 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 CYP2W1Q8TAV3 490 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 R3HDM4Q96D70 268 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ASB2Q96Q27 587 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 NUP88Q99567 741 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 SH2D3AQ9BRG2 576 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 FSD1LQ9BXM9 530 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 QTRT1Q9BXR0 403 aaKnown RBP3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ARMT1Q9H993 441 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 AASDHPPTQ9NRN7 309 aa3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 TRMT13Q9NUP7 481 aaKnown RBP3.59□□□□□ -1.83
RNU6-1088P-201ENST00000516850 PIH1D1Q9NWS0 290 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms