RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 FSD2A1L4K1 749 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PIPSLA2A3N6 862 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PRAMEF22A3QJZ6 481 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 BLACEA4D250 179 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SYNDIG1LA6NDD5 238 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 MYADML2A6NDP7 307 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 POM121BA6NF01 834 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PGPEP1LA6NFU8 196 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRIM64A6NGJ6 449 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRIM64BA6NI03 449 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 A6NLC8 198 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 A6NNZ2 444 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 FAM171A2A8MVW0 826 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 B4DLN1 442 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 C19orf81C9J6K1 198 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 GOLGA6L22H0YM25 854 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 H7C0S8 307 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 INO80B-WBP1J3KQ70 363 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CHL1O00533 1208 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SCDO00767 359 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 APOL1O14791 398 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CPLX1O14810 134 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 KIAA0355O15063 1070 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 FYB1O15117 783 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 KPNA5O15131 536 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SHOXO15266 292 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 P4HA2O15460 535 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 INSIG1O15503 277 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PJA2O43164 708 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PHGDHO43175 533 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 HOXA3O43365 443 aaPredicted RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TBX1O43435 398 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TGM5O43548 720 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 NCK2O43639 380 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRIAP1O43715 76 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 HTATSF1O43719 755 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 KDM1AO60341 852 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TSPAN3O60637 253 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 USO1O60763 962 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 NDUFS2O75306 463 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 RPS6KA4O75676 772 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TSPAN9O75954 239 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TOX4O94842 621 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ENDOD1O94919 500 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 NXPH3O95157 252 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 OAZ2O95190 189 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 APOL3O95236 402 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SGPL1O95470 568 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 STARD3NLO95772 234 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 POMCP01189 267 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ALDH2P05091 517 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PRKCGP05129 697 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 APOA4P06727 396 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC3A2P08195 630 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF888P0CJ79 500 aaPredicted RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SRGAP2CP0DJJ0 459 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZBTB48P10074 688 aaPredicted RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ITGAMP11215 1152 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 COL6A2P12110 1019 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SCG2P13521 617 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 GYS1P13807 737 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 GLULP15104 373 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PDE6AP16499 860 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 STMN1P16949 149 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ATF7P17544 494 aaPredicted RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 NDUFB7P17568 137 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 DESP17661 470 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 AGXTP21549 392 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 C5AR1P21730 350 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ENPP1P22413 925 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CHMP24386 653 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PSMA4P25789 261 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 EEF1GP26641 437 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 HTR1BP28222 390 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PDIA3P30101 505 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 MC4RP32245 332 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 KIF5BP33176 963 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ABCD1P33897 745 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CRHR1P34998 444 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ADRA1BP35368 520 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ATP6V1E1P36543 226 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SERPINF1P36955 418 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ADCY8P40145 1251 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PEX19P40855 299 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PIK3CBP42338 1070 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 WASP42768 502 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 MSH2P43246 934 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 KCNJ5P48544 419 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 HSPA7P48741 367 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 MTNR1BP49286 362 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CEBPAP49715 358 aaPredicted RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PAPOLAP51003 745 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 MECP2P51608 486 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ADCY7P51828 1080 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 KIF11P52732 1056 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ITGA8P53708 1063 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CACNA2D1P54289 1103 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 DRG2P55039 364 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 NR1H2P55055 460 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CASP6P55212 293 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms