RNA–Protein interactions for RNA: ENST00000514520.5

CNGA1-208, Transcript of cyclic nucleotide gated channel alpha 1, human

TSL 2

Gene CNGA1, Length 405 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNGA1-208	ENST00000514520	PLA2G5	P39877	138 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	IL12RB1	P42701	662 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	PRKCZ	Q05513	592 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	PPIL2	Q13356	520 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	SNAPC2	Q13487	334 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	TTF1	Q15361	905 aa	Predicted RBP	4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	CFAP100	Q494V2	611 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	TSHZ3	Q63HK5	1081 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	MFSD5	Q6N075	450 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	C15orf52	Q6ZUT6	534 aa	Known RBP	4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	ANKRD23	Q86SG2	305 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	ERO1B	Q86YB8	467 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	SYT12	Q8IV01	421 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	BEND2	Q8NDZ0	799 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	CPT1C	Q8TCG5	803 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	PROKR1	Q8TCW9	393 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	VOPP1	Q96AW1	172 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	ARL8A	Q96BM9	186 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	CD209	Q9NNX6	404 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	DBNL	Q9UJU6	430 aa	Known RBP	4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	PCDHAC2	Q9Y5I4	1007 aa		4.79	□□□□□ -1.64
CNGA1-208	ENST00000514520	SALL3	Q9BXA9	1300 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	MYH3	P11055	1940 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	UNC80	Q8N2C7	3258 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	GOLGA6L6	A8MZA4	724 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	LEFTY2	O00292	366 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	RFPL3	O75679	317 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	F2	P00734	622 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	LMNA	P02545	664 aa	Known RBP	4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	ITGB1	P05556	798 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	CHML	P26374	656 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	PTGS2	P35354	604 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	ANP32A	P39687	249 aa	Known RBP	4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	NPEPPS	P55786	919 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	ZSCAN25	Q6NSZ9	544 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	CWC27	Q6UX04	472 aa	Known RBP	4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	NECAB2	Q7Z6G3	386 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	XYLT1	Q86Y38	959 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	SLC41A1	Q8IVJ1	513 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	UNC5B	Q8IZJ1	945 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	PAWR	Q96IZ0	340 aa	Known RBP	4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	PRMT6	Q96LA8	375 aa	Predicted RBP	4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	FSD1	Q9BTV5	496 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	C22orf23	Q9BZE7	217 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	SYNPO2L	Q9H987	977 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	DIAPH3	Q9NSV4	1193 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	PAG1	Q9NWQ8	432 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	CPA4	Q9UI42	421 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	CHST2	Q9Y4C5	530 aa		4.78	□□□□□ -1.64
CNGA1-208	ENST00000514520	DDX60L	Q5H9U9	1706 aa	Known RBP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	COL4A3	Q01955	1670 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	GOLIM4	O00461	696 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	EPB41L2	O43491	1005 aa	Known RBP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	IPO13	O94829	963 aa	Known RBP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	ZFY	P08048	801 aa	Predicted RBP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	IL1R1	P14778	569 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	GNAT2	P19087	354 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	FGFR2	P21802	821 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	MCC	P23508	829 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	ADORA1	P30542	326 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	CLK3	P49761	638 aa	Known RBP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	ADCY1	Q08828	1119 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	MCMDC2	Q4G0Z9	681 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	ANKS6	Q68DC2	871 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	GPRIN1	Q7Z2K8	1008 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	VGLL2	Q8N8G2	317 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	SPATA5	Q8NB90	893 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	MAFA	Q8NHW3	353 aa	Predicted RBP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	DIS3L	Q8TF46	1054 aa	Known RBP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	FAM84B	Q96KN1	310 aa	Predicted RBP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	DEFB118	Q96PH6	123 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	UIMC1	Q96RL1	719 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	PARK7	Q99497	189 aa	Known RBP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	TMEM39B	Q9GZU3	492 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	KCNH6	Q9H252	994 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	INTS7	Q9NVH2	962 aa	Known RBP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	THG1L	Q9NWX6	298 aa	Known RBP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	DKK2	Q9UBU2	259 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	ZNF70	Q9UC06	446 aa	Predicted RBP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	GABRQ	Q9UN88	632 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	PCDHB6	Q9Y5E3	794 aa		4.77	□□□□□ -1.65
CNGA1-208	ENST00000514520	MAST2	Q6P0Q8	1798 aa		4.76	□□□□□ -1.65
CNGA1-208	ENST00000514520		A0A1W2PR48	441 aa		4.76	□□□□□ -1.65
CNGA1-208	ENST00000514520	PRSS38	A1L453	326 aa		4.76	□□□□□ -1.65
CNGA1-208	ENST00000514520	SNAP23	O00161	211 aa		4.76	□□□□□ -1.65
CNGA1-208	ENST00000514520	PDHX	O00330	501 aa		4.76	□□□□□ -1.65
CNGA1-208	ENST00000514520	RNF113A	O15541	343 aa	Known RBP	4.76	□□□□□ -1.65
CNGA1-208	ENST00000514520	MGAM	O43451	1857 aa		4.76	□□□□□ -1.65
CNGA1-208	ENST00000514520	IGSF3	O75054	1194 aa		4.76	□□□□□ -1.65
CNGA1-208	ENST00000514520	TMEM127	O75204	238 aa		4.76	□□□□□ -1.65
CNGA1-208	ENST00000514520	RHOBTB3	O94955	611 aa		4.76	□□□□□ -1.65
CNGA1-208	ENST00000514520	SCAF4	O95104	1147 aa	Known RBP	4.76	□□□□□ -1.65
CNGA1-208	ENST00000514520	ABHD16A	O95870	558 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms