RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 HEPACAM2A8MVW5 462 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 TACC1O75410 805 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 PRAMEF12O95522 483 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 FGF19O95750 216 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 BDNFP23560 247 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 CDC25CP30307 473 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 CDH8P55286 799 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 ADAM9Q13443 819 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 CFAP221Q4G0U5 840 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 ARHGAP15Q53QZ3 475 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 ZNF667Q5HYK9 610 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 ZNF658Q5TYW1 1059 aaPredicted RBP20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 ISM2Q6H9L7 571 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 SPOPLQ6IQ16 392 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 SV2AQ7L0J3 742 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 TMEM150AQ86TG1 271 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 PCED1BQ96HM7 432 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 TIGD1Q96MW7 591 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 GSDMAQ96QA5 445 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 SMG9Q9H0W8 520 aaKnown RBP20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 SDCBP2Q9H190 292 aa20.2■□□□□ 0.82
LPCAT1-206ENST00000514484 SLC38A8A6NNN8 435 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 KINO60870 393 aaKnown RBP20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 LRRN2O75325 713 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 SMC2O95347 1197 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 HLA-DRAP01903 254 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 DCNP07585 359 aaKnown RBP20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 CD72P21854 359 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 RPL13P26373 211 aaKnown RBP20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 GDI1P31150 447 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 GCLMP48507 274 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 PMS1P54277 932 aaKnown RBP20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 NLRP12P59046 1061 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 RPL10AP62906 217 aaKnown RBP20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 PFKPQ01813 784 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 PPP3CAQ08209 521 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 SLC44A4Q53GD3 710 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 C4orf50Q6ZRC1 276 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 ARID3BQ8IVW6 561 aaPredicted RBP20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 SPATA20Q8TB22 786 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 FUBP3Q96I24 572 aaKnown RBP eCLIP20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 TRMT61BQ9BVS5 477 aaKnown RBP20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 GPR88Q9GZN0 384 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 BRD9Q9H8M2 597 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 VRTNQ9H8Y1 702 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 TRPV4Q9HBA0 871 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 HEBP1Q9NRV9 189 aa20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 MAGEC2Q9UBF1 373 aaPredicted RBP20.19■□□□□ 0.82
LPCAT1-206ENST00000514484 CACNA1IQ9P0X4 2223 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 TRIM49BA6NDI0 452 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 A8MXQ7 604 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 MAPK13O15264 365 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 GALR2O43603 387 aaPredicted RBP20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 TADA3O75528 432 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 CSH1P0DML2 217 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 CSH2P0DML3 217 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 KRT13P13646 458 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 PSMC3P17980 439 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 PSMC2P35998 433 aaKnown RBP20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 PTPN5P54829 565 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 EDRF1Q3B7T1 1238 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 TPRG1Q6ZUI0 275 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 INTS8Q75QN2 995 aaKnown RBP20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 MYCBPAPQ8TBZ2 947 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 FAM86C1Q9NVL1 165 aa20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 HOOK1Q9UJC3 728 aaKnown RBP20.18■□□□□ 0.82
LPCAT1-206ENST00000514484 H0Y858 1186 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 CLDN5O00501 218 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 NOL4O94818 638 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 F11P03951 625 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 PTPN1P18031 435 aaKnown RBP20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 MAGEA11P43364 429 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 CACNA2D1P54289 1103 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 STARD6P59095 220 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 ORC1Q13415 861 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 MAPRE1Q15691 268 aaKnown RBP20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 PHLDB3Q6NSJ2 640 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 MAB21L3Q8N8X9 362 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 B3GALNT2Q8NCR0 500 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 PJA1Q8NG27 643 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 TAS1R2Q8TE23 839 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 DEPDC1BQ8WUY9 529 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 LRRC3BQ96PB8 259 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 PHOX2BQ99453 314 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 PRRX2Q99811 253 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 ZNF518BQ9C0D4 1074 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 TASP1Q9H6P5 420 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 TMEM30AQ9NV96 361 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 HMGXB4Q9UGU5 601 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 MAN1B1Q9UKM7 699 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 PATJQ8NI35 1801 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 MYO16Q9Y6X6 1858 aa20.17■□□□□ 0.82
LPCAT1-206ENST00000514484 IKBKBO14920 756 aa20.16■□□□□ 0.82
LPCAT1-206ENST00000514484 EPB41P11171 864 aaKnown RBP20.16■□□□□ 0.82
LPCAT1-206ENST00000514484 GRIK1P39086 918 aa20.16■□□□□ 0.82
LPCAT1-206ENST00000514484 UBXN2BQ14CS0 331 aa20.16■□□□□ 0.82
LPCAT1-206ENST00000514484 TXNDC8Q6A555 127 aa20.16■□□□□ 0.82
LPCAT1-206ENST00000514484 MFSD6LQ8IWD5 586 aa20.16■□□□□ 0.82
LPCAT1-206ENST00000514484 YAF2Q8IY57 180 aa20.16■□□□□ 0.82
LPCAT1-206ENST00000514484 CCDC105Q8IYK2 499 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms