RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 IFNAR2P48551 515 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 CSNK1EP49674 416 aaKnown RBP3.56□□□□□ -1.84
CHD1-211ENST00000514344 UCNP55089 124 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 PCBP4P57723 403 aaKnown RBP3.56□□□□□ -1.84
CHD1-211ENST00000514344 PSMC5P62195 406 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 PDAP1Q13442 181 aaKnown RBP3.56□□□□□ -1.84
CHD1-211ENST00000514344 XKR9Q5GH70 373 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 C20orf194Q5TEA3 1177 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 KDM7AQ6ZMT4 941 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 TMEM130Q8N3G9 435 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 NCOA7Q8NI08 942 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 KCNE4Q8WWG9 221 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 ATP2A3Q93084 1043 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 PPP1R10Q96QC0 940 aaKnown RBP3.56□□□□□ -1.84
CHD1-211ENST00000514344 MTRQ99707 1265 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 ARHGAP9Q9BRR9 750 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 ZDHHC5Q9C0B5 715 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 ZNF768Q9H5H4 540 aaKnown RBP3.56□□□□□ -1.84
CHD1-211ENST00000514344 FTSJ1Q9UET6 329 aa3.56□□□□□ -1.84
CHD1-211ENST00000514344 PLEKHB1Q9UF11 243 aaPredicted RBP3.56□□□□□ -1.84
CHD1-211ENST00000514344 MAGED2Q9UNF1 606 aaPredicted RBP3.56□□□□□ -1.84
CHD1-211ENST00000514344 V9GY48 417 aaPredicted RBP3.56□□□□□ -1.84
CHD1-211ENST00000514344 NIPBLQ6KC79 2804 aaeCLIP3.56□□□□□ -1.843e-6■□□□□ 9.5
CHD1-211ENST00000514344 A0A1B0GTW7 788 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 E7EWF7 191 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 SYN3O14994 580 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 ASAP2O43150 1006 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 PSMD10O75832 226 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 CKMP06732 381 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 FAM87AP0C7U9 286 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 TNFSF9P41273 254 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 GRK6P43250 576 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 BNC1Q01954 994 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 YWHAHQ04917 246 aaPredicted RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 KDSRQ06136 332 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 SCRN1Q12765 414 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 TFDP1Q14186 410 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 MRPL58Q14197 206 aaKnown RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 MXD4Q14582 209 aaPredicted RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 SUZ12Q15022 739 aaKnown RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 PDGFRLQ15198 375 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 PCBP1Q15365 356 aaKnown RBP eCLIP3.55□□□□□ -1.84
CHD1-211ENST00000514344 MGAT5BQ3V5L5 792 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 WDR45BQ5MNZ6 344 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 EOGTQ5NDL2 527 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 PRAMEF14Q5SWL7 426 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 ANKRD45Q5TZF3 282 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 TMTC3Q6ZXV5 915 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 CACUL1Q86Y37 369 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 GATAD2AQ86YP4 633 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 REXO1Q8N1G1 1221 aaKnown RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 ASAP3Q8TDY4 903 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 OSCP1Q8WVF1 389 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 TCP11Q8WWU5 503 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 RIT2Q99578 217 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 LRRC2Q9BYS8 371 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 IL21Q9HBE4 155 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 TRPC7Q9HCX4 862 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 EIF2B4Q9UI10 523 aaKnown RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 SLCO1B1Q9Y6L6 691 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 SMIM28A0A1B0GU29 152 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 EML1O00423 815 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 BCAT2O15382 392 aaPredicted RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 KAT7O95251 611 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 MS4A1P11836 297 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 HOXB2P14652 356 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 NDUFV2P19404 249 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 MARCKSP29966 332 aaPredicted RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 CDC25CP30307 473 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 YWHABP31946 246 aaKnown RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 HSPA4P34932 840 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 QARSP47897 775 aaKnown RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 SLC6A11P48066 632 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 MRPS21P82921 87 aaKnown RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 NR1H3Q13133 447 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 EML3Q32P44 896 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 CENPPQ6IPU0 288 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 CASC1Q6TDU7 716 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 DBX2Q6ZNG2 339 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 ITIH5Q86UX2 942 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 DHX40Q8IX18 779 aaKnown RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 SRRM1Q8IYB3 904 aaKnown RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 CEP120Q8N960 986 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 KRI1Q8N9T8 703 aaKnown RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 FANCBQ8NB91 859 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 SNX19Q92543 992 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 DDX12PQ92771 950 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 SLC5A5Q92911 643 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 EXTL1Q92935 676 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 ZNF419Q96HQ0 510 aaPredicted RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 SLC22A12Q96S37 553 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 MAP3K14Q99558 947 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 ADPGKQ9BRR6 497 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 GPR174Q9BXC1 333 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 CHMP4BQ9H444 224 aaKnown RBP3.55□□□□□ -1.84
CHD1-211ENST00000514344 PDZD7Q9H5P4 517 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 XPNPEP1Q9NQW7 623 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 BARHL2Q9NY43 387 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 SLC12A7Q9Y666 1083 aa3.55□□□□□ -1.84
CHD1-211ENST00000514344 CNTNAP5Q8WYK1 1306 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms