RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 FANCGO15287 622 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 BAIAP3O94812 1187 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 KRT3P12035 628 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 DESP17661 470 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 ALDH7A1P49419 539 aaKnown RBP16.9■□□□□ 0.3
NUP54-214ENST00000514307 TSPY1Q01534 308 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 PLCB3Q01970 1234 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 PIGHQ14442 188 aaPredicted RBP16.9■□□□□ 0.3
NUP54-214ENST00000514307 CFAP221Q4G0U5 840 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 OVOS1Q6IE37 1185 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 CD300LGQ6UXG3 332 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 TMEM110Q86TL2 294 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 OSTM1Q86WC4 334 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 C3orf58Q8NDZ4 430 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 MYCBPAPQ8TBZ2 947 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 RABGGTAQ92696 567 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 SYT15Q9BQS2 421 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 SLC4A5Q9BY07 1137 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 DUSP16Q9BY84 665 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 OXCT2Q9BYC2 517 aaPredicted RBP16.9■□□□□ 0.3
NUP54-214ENST00000514307 DPEP3Q9H4B8 488 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 NRDE2Q9H7Z3 1164 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 FAM49BQ9NUQ9 324 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 ANAPC7Q9UJX3 599 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 TIMM13Q9Y5L4 95 aaPredicted RBP16.9■□□□□ 0.3
NUP54-214ENST00000514307 CITO14578 2027 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 ANK1P16157 1881 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 BRCA2P51587 3418 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 FRMPD3Q5JV73 1810 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 CCDC66A2RUB6 948 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 TRIM43BA6NCK2 446 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 TMEM110-MUSTN1A8MSY1 372 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 SPOPO43791 374 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 PROSCO94903 275 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 UPP2O95045 317 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 BRCC3P46736 316 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 GSCP56915 257 aaPredicted RBP16.89■□□□□ 0.29
NUP54-214ENST00000514307 YWHAHQ04917 246 aaPredicted RBP16.89■□□□□ 0.29
NUP54-214ENST00000514307 PDCLQ13371 301 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 ACAP1Q15027 740 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 PKDCCQ504Y2 493 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 DCP1BQ8IZD4 617 aaKnown RBP16.89■□□□□ 0.29
NUP54-214ENST00000514307 LRRC43Q8N309 656 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 SLC2A14Q8TDB8 520 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 TOP1MTQ969P6 601 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 TRIM43Q96BQ3 446 aaPredicted RBP16.89■□□□□ 0.29
NUP54-214ENST00000514307 MCRS1Q96EZ8 462 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 HES6Q96HZ4 224 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 NCAPGQ9BPX3 1015 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 CARD6Q9BX69 1037 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 PLVAPQ9BX97 442 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 IL23AQ9NPF7 189 aa16.89■□□□□ 0.29
NUP54-214ENST00000514307 CTAGE15A4D2H0 777 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 KCNK3O14649 394 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 ATMINO43313 823 aaPredicted RBP16.88■□□□□ 0.29
NUP54-214ENST00000514307 DGKIO75912 1065 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 OAZ2O95190 189 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 FGBP02675 491 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 CTAGE8P0CG41 777 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 EN2P19622 333 aaPredicted RBP16.88■□□□□ 0.29
NUP54-214ENST00000514307 COMTP21964 271 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 ADORA2BP29275 332 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 PDE4CQ08493 712 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 PPIGQ13427 754 aaKnown RBP eCLIP16.88■□□□□ 0.29
NUP54-214ENST00000514307 TCTN1Q2MV58 587 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 MDH1BQ5I0G3 518 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 OR6B2Q6IFH4 312 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.88■□□□□ 0.29
NUP54-214ENST00000514307 PHLDB2Q86SQ0 1253 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 CTAGE6Q86UF2 777 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 CTAGE4Q8IX94 777 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 CPXM1Q96SM3 734 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 NAP1L3Q99457 506 aaPredicted RBP16.88■□□□□ 0.29
NUP54-214ENST00000514307 CACNG4Q9UBN1 327 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 ADAM28Q9UKQ2 775 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 RALGAPA2Q2PPJ7 1873 aa16.88■□□□□ 0.29
NUP54-214ENST00000514307 FAM170AA1A519 330 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 EFCAB8A8MWE9 144 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 H7C4K7 107 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 I3L4J1 428 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 XPO1O14980 1071 aaKnown RBP16.87■□□□□ 0.29
NUP54-214ENST00000514307 NCK2O43639 380 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 ATP2C2O75185 946 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 GALTP07902 379 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 FAM200BP0CF97 657 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 CSF2RAP15509 400 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 IGFBP6P24592 240 aaPredicted RBP16.87■□□□□ 0.29
NUP54-214ENST00000514307 ACAT1P24752 427 aaKnown RBP16.87■□□□□ 0.29
NUP54-214ENST00000514307 MAN1A1P33908 653 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 SCNN1AP37088 669 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 CETN2P41208 172 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 PTPN20Q4JDL3 420 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 PAN2Q504Q3 1202 aaKnown RBP16.87■□□□□ 0.29
NUP54-214ENST00000514307 FAM171BQ6P995 826 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 C4orf50Q6ZRC1 276 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 TTC30AQ86WT1 665 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 XYLT1Q86Y38 959 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 KCTD13Q8WZ19 329 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 DNAJB4Q9UDY4 337 aa16.87■□□□□ 0.29
NUP54-214ENST00000514307 CHORDC1Q9UHD1 332 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms