RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ISM2Q6H9L7 571 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 TANGO2Q6ICL3 276 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 FRMD5Q7Z6J6 570 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 WHAMMQ8TF30 809 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 ING5Q8WYH8 240 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 SLC35C1Q96A29 364 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 ELMO3Q96BJ8 720 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 PCED1BQ96HM7 432 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 SEPT5Q99719 369 aaPredicted RBP10.37□□□□□ -0.75
RNF4-221ENST00000513643 DPEP3Q9H4B8 488 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 CYP3A43Q9HB55 503 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 ABI2Q9NYB9 513 aaPredicted RBP10.37□□□□□ -0.75
RNF4-221ENST00000513643 NXF1Q9UBU9 619 aaKnown RBP10.37□□□□□ -0.75
RNF4-221ENST00000513643 R3HCC1Q9Y3T6 440 aaKnown RBP10.37□□□□□ -0.75
RNF4-221ENST00000513643 VPS13AQ96RL7 3174 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 NCANO14594 1321 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 A0A1W2PRU2 124 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 KRBA1A5PL33 1030 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 ARNTLO00327 626 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 TADA3O75528 432 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 PDGFBP01127 241 aaPredicted RBP10.36□□□□□ -0.75
RNF4-221ENST00000513643 CSH1P0DML2 217 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 CSH2P0DML3 217 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 EPB41P11171 864 aaKnown RBP10.36□□□□□ -0.75
RNF4-221ENST00000513643 MYL4P12829 197 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 KRT13P13646 458 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 GJA1P17302 382 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 CDR1P51861 262 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 CACNA2D1P54289 1103 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 NLRP12P59046 1061 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 PSMC1P62191 440 aaKnown RBP10.36□□□□□ -0.75
RNF4-221ENST00000513643 RPL10AP62906 217 aaKnown RBP10.36□□□□□ -0.75
RNF4-221ENST00000513643 GPC5P78333 572 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 CBWD6Q4V339 395 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 CBWD3Q5JTY5 395 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 CBWD5Q5RIA9 395 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 STXBP5Q5T5C0 1151 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 SPOPLQ6IQ16 392 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 C4orf50Q6ZRC1 276 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 UNC93AQ86WB7 457 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 FBXL6Q8N531 539 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 B3GALNT2Q8NCR0 500 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 ST13P5Q8NFI4 369 aaPredicted RBP10.36□□□□□ -0.75
RNF4-221ENST00000513643 OR6B3Q8NGW1 331 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 LMO3Q8TAP4 145 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 GIPC2Q8TF65 315 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 NELFBQ8WX92 580 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 SMARCD2Q92925 531 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 MYLPFQ96A32 169 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 PBXIP1Q96AQ6 731 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 RSPRY1Q96DX4 576 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 C8orf48Q96LL4 319 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 LRRC3BQ96PB8 259 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 TSG101Q99816 390 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 DDX23Q9BUQ8 820 aaKnown RBP10.36□□□□□ -0.75
RNF4-221ENST00000513643 TTLL2Q9BWV7 592 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 B3GNT5Q9BYG0 378 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 SNX25Q9H3E2 840 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 CLSTN2Q9H4D0 955 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 FAM124BQ9H5Z6 455 aaPredicted RBP10.36□□□□□ -0.75
RNF4-221ENST00000513643 METTL14Q9HCE5 456 aaKnown RBP10.36□□□□□ -0.75
RNF4-221ENST00000513643 TRPV5Q9NQA5 729 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 IL37Q9NZH6 218 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 MAGEC2Q9UBF1 373 aaPredicted RBP10.36□□□□□ -0.75
RNF4-221ENST00000513643 DMDP11532 3685 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 WDR87Q6ZQQ6 2873 aa10.36□□□□□ -0.75
RNF4-221ENST00000513643 FAM92AA1XBS5 289 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 SLC38A8A6NNN8 435 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 A8MXQ7 604 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 TULP1O00294 542 aaPredicted RBP10.35□□□□□ -0.75
RNF4-221ENST00000513643 BIN1O00499 593 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 TNFRSF10BO14763 440 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 STX10O60499 249 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 CILPO75339 1184 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 COL9A1P20849 921 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 BDNFP23560 247 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 GABRR2P28476 465 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 CDC25CP30307 473 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 STARD6P59095 220 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 NOP14P78316 857 aaKnown RBP10.35□□□□□ -0.75
RNF4-221ENST00000513643 FCHO2Q0JRZ9 810 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 STIM1Q13586 685 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 VEPH1Q14D04 833 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 CAMK4Q16566 473 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 MDH1BQ5I0G3 518 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 IER5LQ5T953 404 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 SDHAF4Q5VUM1 108 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 CWF19L1Q69YN2 538 aaKnown RBP10.35□□□□□ -0.75
RNF4-221ENST00000513643 PHLDB3Q6NSJ2 640 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 RBM43Q6ZSC3 357 aaKnown RBP10.35□□□□□ -0.75
RNF4-221ENST00000513643 IRF2BP1Q8IU81 584 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 SPATA2LQ8IUW3 424 aaPredicted RBP10.35□□□□□ -0.75
RNF4-221ENST00000513643 MFSD6LQ8IWD5 586 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 TRIM59Q8IWR1 403 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 FUKQ8N0W3 1084 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 FBXL13Q8NEE6 735 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 ZSCAN18Q8TBC5 510 aaPredicted RBP10.35□□□□□ -0.75
RNF4-221ENST00000513643 GPR152Q8TDT2 470 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 TWNKQ96RR1 684 aa10.35□□□□□ -0.75
RNF4-221ENST00000513643 SLC46A2Q9BY10 475 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms