RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 GPAT2Q6NUI2 795 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 CLEC10AQ8IUN9 316 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 CYFIP2Q96F07 1278 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 SNF8Q96H20 258 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 RIC8BQ9NVN3 520 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 DDX43Q9NXZ2 648 aaKnown RBP4.43□□□□□ -1.7
VCAN-209ENST00000513016 CD274Q9NZQ7 290 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 RHOBTB1O94844 696 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 THOP1P52888 689 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 C21orf59P57076 290 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 ESRRGP62508 458 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 GPR142Q7Z601 462 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 UBA3Q8TBC4 463 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 AKT1S1Q96B36 256 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 NR1H4Q96RI1 486 aaPredicted RBP4.43□□□□□ -1.7
VCAN-209ENST00000513016 TRMT6Q9UJA5 497 aaKnown RBP4.43□□□□□ -1.7
VCAN-209ENST00000513016 ZNF510Q9Y2H8 683 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 CNTNAP5Q8WYK1 1306 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 PIK3C2BO00750 1634 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 A0A1B0GUA9 196 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 PALMO75781 387 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 CHRM3P20309 590 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 SPRP35270 261 aaPredicted RBP4.43□□□□□ -1.7
VCAN-209ENST00000513016 LAMTOR4Q0VGL1 99 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 EFEMP1Q12805 493 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 MUM1Q2TAK8 710 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 USP41Q3LFD5 358 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 NOMO2Q5JPE7 1267 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 HABP4Q5JVS0 413 aaKnown RBP4.43□□□□□ -1.7
VCAN-209ENST00000513016 ZDHHC17Q8IUH5 632 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 TRIM59Q8IWR1 403 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 RNPC3Q96LT9 517 aaKnown RBP4.43□□□□□ -1.7
VCAN-209ENST00000513016 SERPINB11Q96P15 392 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 OMDQ99983 421 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 CAPS2Q9BXY5 557 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 POLD4Q9HCU8 107 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 KCNQ5Q9NR82 932 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 DRG1Q9Y295 367 aaKnown RBP4.43□□□□□ -1.7
VCAN-209ENST00000513016 FAM32AQ9Y421 112 aaKnown RBP4.43□□□□□ -1.7
VCAN-209ENST00000513016 BCL9O00512 1426 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 ZNF609O15014 1411 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 SYNDIG1LA6NDD5 238 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 TBC1D3BA6NDS4 549 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 DARSP14868 501 aaKnown RBP4.43□□□□□ -1.7
VCAN-209ENST00000513016 RFC1P35251 1148 aaPredicted RBP4.43□□□□□ -1.7
VCAN-209ENST00000513016 MDM2Q00987 491 aaPredicted RBP4.43□□□□□ -1.7
VCAN-209ENST00000513016 GRIN1Q05586 938 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 BST2Q10589 180 aaKnown RBP4.43□□□□□ -1.7
VCAN-209ENST00000513016 PGM5Q15124 567 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 ELF2Q15723 593 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 TRIM65Q6PJ69 517 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 ZPBP2Q6X784 338 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 MIB1Q86YT6 1006 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 CCNJLQ8IV13 435 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 LZTR1Q8N653 840 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 ARMC2Q8NEN0 867 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 FEZF2Q8TBJ5 459 aa4.43□□□□□ -1.7
VCAN-209ENST00000513016 CASTOR2A6NHX0 329 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 CXCL14O95715 111 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 ESRRAP11474 423 aaPredicted RBP4.42□□□□□ -1.7
VCAN-209ENST00000513016 EPB42P16452 691 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 CCR1P32246 355 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 ADCYAP1R1P41586 468 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 DDR1Q08345 913 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 CUL2Q13617 745 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 PDK2Q15119 407 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 MTSS1LQ765P7 747 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 PRUNE1Q86TP1 453 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 RNF135Q8IUD6 432 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 SUGP1Q8IWZ8 645 aaKnown RBP4.42□□□□□ -1.7
VCAN-209ENST00000513016 RSPH1Q8WYR4 309 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 ELMO2Q96JJ3 720 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 TXLNGQ9NUQ3 528 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 SMARCAL1Q9NZC9 954 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 A0A088AWK7 358 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 WEE2P0C1S8 567 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 ZNF10P21506 573 aaPredicted RBP4.42□□□□□ -1.7
VCAN-209ENST00000513016 FGFR2P21802 821 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 PSEN1P49768 467 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 FLT3LGP49771 235 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 TBX4P57082 545 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 CNTN1Q12860 1018 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 LLGL1Q15334 1064 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 ZC3H12BQ5HYM0 836 aaKnown RBP4.42□□□□□ -1.7
VCAN-209ENST00000513016 GLRA4Q5JXX5 417 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 PSRC1Q6PGN9 363 aaPredicted RBP4.42□□□□□ -1.7
VCAN-209ENST00000513016 FAM47EQ6ZV65 393 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 DDIASQ8IXT1 998 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 TNS4Q8IZW8 715 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 TAGAPQ8N103 731 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 KRT78Q8N1N4 520 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 CPA6Q8N4T0 437 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 PDCD7Q8N8D1 485 aaKnown RBP4.42□□□□□ -1.7
VCAN-209ENST00000513016 TADA1Q96BN2 335 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 TMA16Q96EY4 203 aaKnown RBP4.42□□□□□ -1.7
VCAN-209ENST00000513016 SMARCD1Q96GM5 515 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 SPACA7Q96KW9 195 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 HIPK3Q9H422 1215 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 PRDM16Q9HAZ2 1276 aa4.42□□□□□ -1.7
VCAN-209ENST00000513016 PDE11AQ9HCR9 933 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms