RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 KPNA1P52294 538 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-208ENST00000512928 AP3M2P53677 418 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 FAM160A1Q05DH4 1040 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 IFRD2Q12894 506 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-208ENST00000512928 KCNB1Q14721 858 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 MAPRE1Q15691 268 aaKnown RBP6.95□□□□□ -1.3
KDM3B-208ENST00000512928 ZNF667Q5HYK9 610 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 ISM2Q6H9L7 571 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 VITQ6UXI7 678 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 GAREM2Q75VX8 874 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 DPH6Q7L8W6 267 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 ARID3BQ8IVW6 561 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-208ENST00000512928 FAM186BQ8IYM0 893 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 GUF1Q8N442 669 aaKnown RBP6.95□□□□□ -1.3
KDM3B-208ENST00000512928 MAB21L3Q8N8X9 362 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 TTC8Q8TAM2 541 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 SPATA20Q8TB22 786 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 SPATA18Q8TC71 538 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 PLEKHO2Q8TD55 490 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 CSGALNACT1Q8TDX6 532 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 PARD3BQ8TEW8 1205 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 KBTBD7Q8WVZ9 684 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 ZNF516Q92618 1163 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 MRPS31Q92665 395 aaKnown RBP6.95□□□□□ -1.3
KDM3B-208ENST00000512928 IRF7Q92985 503 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 SMARCE1Q969G3 411 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 EEF2KMTQ96G04 330 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 TSG101Q99816 390 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 MED10Q9BTT4 135 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 LRRC3Q9BY71 257 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 IMPG2Q9BZV3 1241 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 SMYD3Q9H7B4 428 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 LMBRD1Q9NUN5 540 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 CDH9Q9ULB4 789 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 NDRG2Q9UN36 371 aaKnown RBP6.95□□□□□ -1.3
KDM3B-208ENST00000512928 FARP1Q9Y4F1 1045 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-208ENST00000512928 KANSL1LA0AUZ9 987 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 FAM170BA6NMN3 283 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 SLC38A8A6NNN8 435 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 GABRDO14764 452 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 LRRN2O75325 713 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 AKAP3O75969 853 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 ABL1P00519 1130 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 CKMP06732 381 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 CSH1P0DML2 217 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 CSH2P0DML3 217 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 TRIM21P19474 475 aaKnown RBP6.94□□□□□ -1.3
KDM3B-208ENST00000512928 PSMC2P35998 433 aaKnown RBP6.94□□□□□ -1.3
KDM3B-208ENST00000512928 GCLMP48507 274 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 CLCN6P51797 869 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 VAMP7P51809 220 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 NUBP1P53384 320 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 CDH8P55286 799 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 NLRP12P59046 1061 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 PRKCQQ04759 706 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 ORC1Q13415 861 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 ADAM9Q13443 819 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 CFAP221Q4G0U5 840 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 DCAF17Q5H9S7 520 aaPredicted RBP6.94□□□□□ -1.3
KDM3B-208ENST00000512928 TCERG1LQ5VWI1 586 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 TXNDC8Q6A555 127 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 ZNF852Q6ZMS4 543 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 INTS8Q75QN2 995 aaKnown RBP6.94□□□□□ -1.3
KDM3B-208ENST00000512928 FRMD5Q7Z6J6 570 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 SLC9A9Q8IVB4 645 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 CCDC105Q8IYK2 499 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 DTWD2Q8NBA8 298 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 CCDC150Q8NCX0 1101 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 PJA1Q8NG27 643 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 MYCBPAPQ8TBZ2 947 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 DEPDC1BQ8WUY9 529 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 DNASE1L2Q92874 299 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 E2F7Q96AV8 911 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 PCED1BQ96HM7 432 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 FUBP3Q96I24 572 aaKnown RBP eCLIP6.94□□□□□ -1.3
KDM3B-208ENST00000512928 ZFYVE19Q96K21 471 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 BCO2Q9BYV7 579 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 GZF1Q9H116 711 aaPredicted RBP6.94□□□□□ -1.3
KDM3B-208ENST00000512928 IRF2BPLQ9H1B7 796 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 DPEP3Q9H4B8 488 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 TASP1Q9H6P5 420 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 ABCB6Q9NP58 842 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 CRTAC1Q9NQ79 661 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 DMAC2Q9NW81 257 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 SPATA6Q9NWH7 488 aaPredicted RBP6.94□□□□□ -1.3
KDM3B-208ENST00000512928 THG1LQ9NWX6 298 aaKnown RBP6.94□□□□□ -1.3
KDM3B-208ENST00000512928 UXTQ9UBK9 157 aaPredicted RBP6.94□□□□□ -1.3
KDM3B-208ENST00000512928 TRAF3IP3Q9Y228 551 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 PIAS3Q9Y6X2 628 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 ATP8B3O60423 1300 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 MYO15AQ9UKN7 3530 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 DOCK8Q8NF50 2099 aa6.94□□□□□ -1.3
KDM3B-208ENST00000512928 CFAP54Q96N23 3096 aa6.93□□□□□ -1.3
KDM3B-208ENST00000512928 DOCK6Q96HP0 2047 aa6.93□□□□□ -1.3
KDM3B-208ENST00000512928 NOTCH4Q99466 2003 aa6.93□□□□□ -1.3
KDM3B-208ENST00000512928 F8VP50 259 aa6.93□□□□□ -1.3
KDM3B-208ENST00000512928 CLDN5O00501 218 aa6.93□□□□□ -1.3
KDM3B-208ENST00000512928 TRIM66O15016 1216 aa6.93□□□□□ -1.3
KDM3B-208ENST00000512928 CETN3O15182 167 aa6.93□□□□□ -1.3
KDM3B-208ENST00000512928 GADD45BO75293 160 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms