RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 SLC2A7Q6PXP3 512 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 YTHDF3Q7Z739 585 aaKnown RBP2.95□□□□□ -1.94
PDGFC-208ENST00000512711 CHSY1Q86X52 802 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 GRAMD1CQ8IYS0 662 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 Q8N9P0 234 aaPredicted RBP2.95□□□□□ -1.94
PDGFC-208ENST00000512711 ATRIPQ8WXE1 791 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 GLG1Q92896 1179 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 HOOK2Q96ED9 719 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 MRGPRX1Q96LB2 322 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 P2RX7Q99572 595 aaKnown RBP2.95□□□□□ -1.94
PDGFC-208ENST00000512711 CGRRF1Q99675 332 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 PTDSS2Q9BVG9 487 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 SIK2Q9H0K1 926 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 DUSP22Q9NRW4 184 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 HOMER2Q9NSB8 354 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 STAP2Q9UGK3 403 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 FEZ2Q9UHY8 353 aaPredicted RBP2.95□□□□□ -1.94
PDGFC-208ENST00000512711 NDRG4Q9ULP0 352 aaKnown RBP2.95□□□□□ -1.94
PDGFC-208ENST00000512711 BTBD3Q9Y2F9 522 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 SLC16A3O15427 465 aaKnown RBP2.94□□□□□ -1.94
PDGFC-208ENST00000512711 CSF1RP07333 972 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 PF4V1P10720 104 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 AKAP5P24588 427 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 ADORA2AP29274 412 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 AMOTQ4VCS5 1084 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 ATAT1Q5SQI0 421 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 TMEM240Q5SV17 173 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 ZNF618Q5T7W0 954 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 EMC10Q5UCC4 262 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 KIAA1614Q5VZ46 1190 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 SUMO4Q6EEV6 95 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 SLC18B1Q6NT16 456 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 SLC29A4Q7RTT9 530 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 ZNF366Q8N895 744 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 CYP2W1Q8TAV3 490 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 DDX17Q92841 729 aaKnown RBP2.94□□□□□ -1.94
PDGFC-208ENST00000512711 ZBTB9Q96C00 473 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 CHMP4CQ96CF2 233 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 R3HDM4Q96D70 268 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 LENG8Q96PV6 779 aaPredicted RBP2.94□□□□□ -1.94
PDGFC-208ENST00000512711 SPRTNQ9H040 489 aaPredicted RBP2.94□□□□□ -1.94
PDGFC-208ENST00000512711 BHMT2Q9H2M3 363 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 SLC12A5Q9H2X9 1139 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 TCF7L1Q9HCS4 588 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 XPR1Q9UBH6 696 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 TBC1D30Q9Y2I9 924 aa2.94□□□□□ -1.94
PDGFC-208ENST00000512711 ZNF804BA4D1E1 1349 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 QSOX1O00391 747 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 PPP6CO00743 305 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 ADAMTS3O15072 1205 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 AP1G1O43747 822 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 TLR5O60602 858 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 GRPP07492 148 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 ATXN1LP0C7T5 689 aaKnown RBP2.93□□□□□ -1.94
PDGFC-208ENST00000512711 MYBP10242 640 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 EPHB2P29323 1055 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 KCNJ5P48544 419 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 SLC11A2P49281 568 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 TUBA4AP68366 448 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 SLC10A2Q12908 348 aaPredicted RBP2.93□□□□□ -1.94
PDGFC-208ENST00000512711 MYO1EQ12965 1108 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 EZH2Q15910 746 aaKnown RBP2.93□□□□□ -1.94
PDGFC-208ENST00000512711 AARS2Q5JTZ9 985 aaKnown RBP2.93□□□□□ -1.94
PDGFC-208ENST00000512711 DEPDC1Q5TB30 811 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 FCRL6Q6DN72 434 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 SFRP4Q6FHJ7 346 aaPredicted RBP2.93□□□□□ -1.94
PDGFC-208ENST00000512711 ANKRD16Q6P6B7 361 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 LAYNQ6UX15 382 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 PARS2Q7L3T8 475 aaKnown RBP2.93□□□□□ -1.94
PDGFC-208ENST00000512711 NEK8Q86SG6 692 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 ZBTB46Q86UZ6 589 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 LRRC71Q8N4P6 559 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 C9orf106Q8NAJ2 232 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 PPP1R35Q8TAP8 253 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 STAG1Q8WVM7 1258 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 XAGE5Q8WWM1 108 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 CDK5RAP3Q96JB5 506 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 FAM167AQ96KS9 214 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 C5orf34Q96MH7 638 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 ZNF48Q96MX3 618 aaPredicted RBP2.93□□□□□ -1.94
PDGFC-208ENST00000512711 CXorf36Q9H7Y0 433 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 AASDHPPTQ9NRN7 309 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 ANKRD6Q9Y2G4 727 aa2.93□□□□□ -1.94
PDGFC-208ENST00000512711 A0A088AWK7 358 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 SMIM35A0A1B0GVV1 85 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 TMEM233B4DJY2 109 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 ABLIM3O94929 683 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 NXPH3O95157 252 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 NCLP19338 710 aaKnown RBP2.92□□□□□ -1.94
PDGFC-208ENST00000512711 FPR3P25089 353 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 CTGFP29279 349 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 NEK2P51955 445 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 LOXL3P58215 753 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 HOXA4Q00056 320 aaPredicted RBP2.92□□□□□ -1.94
PDGFC-208ENST00000512711 CTBP1Q13363 440 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 E2F2Q14209 437 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 PTCHD3Q3KNS1 767 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 CATSPERGQ6ZRH7 1159 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 Q6ZWC4 215 aa2.92□□□□□ -1.94
PDGFC-208ENST00000512711 WDR53Q7Z5U6 358 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms