RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TGM1P22735 817 aa6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 CAMLGP49069 296 aa6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 ACTR1AP61163 376 aa6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 TYRO3Q06418 890 aa6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 NMIQ13287 307 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 CNGA2Q16280 664 aa6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 DPF2Q92785 391 aa6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 OTUD5Q96G74 571 aa6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 DDX50Q9BQ39 737 aaKnown RBP6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 TCF25Q9BQ70 676 aa6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 NOL10Q9BSC4 688 aaKnown RBP6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 GCOM2Q9BZD3 368 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 MRPL46Q9H2W6 279 aaKnown RBP6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 LPAR3Q9UBY5 353 aa6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 CGGBP1Q9UFW8 167 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 GPR55Q9Y2T6 319 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC11-209ENST00000512476 A0A1W2PRV1 198 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 SMIM30A4D0T7 59 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 MYO1FO00160 1098 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 RNF113AO15541 343 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 TLR2O60603 784 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 IDH1O75874 414 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 LTA4HP09960 611 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 HADHBP55084 474 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 SEC23AQ15436 765 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 SLC39A12Q504Y0 691 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ESRP1Q6NXG1 681 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 FBXW8Q8N3Y1 598 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 TDRD5Q8NAT2 981 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 SPATA20Q8TB22 786 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 VWCEQ96DN2 955 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 TXN2Q99757 166 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 DPH2Q9BQC3 489 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 USP26Q9BXU7 913 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 SLC25A18Q9H1K4 315 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 RPRD1BQ9NQG5 326 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 SEMA3GQ9NS98 782 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 SOHLH2Q9NX45 425 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 MALT1Q9UDY8 824 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 TMEFF2Q9UIK5 374 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 CBLCQ9ULV8 474 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 BARX2Q9UMQ3 279 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 AURKCQ9UQB9 309 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 TNFSF13BQ9Y275 285 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 FPGT-TNNI3KV9GXZ4 949 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 TRAV34A0A0B4J273 112 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 TMEM63AO94886 807 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 TPBGLP0DKB5 382 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ACTN1P12814 892 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 LCP1P13796 627 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZNF24P17028 368 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 PPARGP37231 505 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ACAA2P42765 397 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ETV1P50549 477 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 METAP1P53582 386 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 SUMO3P55854 103 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 COPS2P61201 443 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 CLN3Q13286 438 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 SNX1Q13596 522 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 BYSLQ13895 437 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 MED22Q15528 200 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ADCK5Q3MIX3 580 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZRANB3Q5FWF4 1079 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 RNFT1Q5M7Z0 435 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ATPAF1Q5TC12 328 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 AADACL4Q5VUY2 407 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ASTLQ6HA08 431 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 BORAQ6PGQ7 559 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ILDR2Q71H61 639 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 WDTC1Q8N5D0 677 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ANKS4BQ8N8V4 417 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 GALNT6Q8NCL4 622 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ANKRD20A12PQ8NF67 263 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 FAM216AQ8WUB2 273 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ATP6V0A1Q93050 837 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 PMEPA1Q969W9 287 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 PGAP3Q96FM1 320 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 LBHD1Q9BQE6 289 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 HERC2P3Q9BVR0 1158 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 MOV10L1Q9BXT6 1211 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 NT5C3AQ9H0P0 336 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 PABPC3Q9H361 631 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZMAT4Q9H898 229 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 PICK1Q9NRD5 415 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 TOMM22Q9NS69 142 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 TOR4AQ9NXH8 423 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 AJAP1Q9UKB5 411 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 AGO2Q9UKV8 859 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 TRAF3IP3Q9Y228 551 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 NAALAD2Q9Y3Q0 740 aa6.69□□□□□ -1.34
TRAPPC11-209ENST00000512476 TET3O43151 1660 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 PLA2R1Q13018 1463 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 KANK1Q14678 1352 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CLRN2A0PK11 232 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CCDC169A6NNP5 214 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 FCHO1O14526 889 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 PRDM1O75626 825 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 SEC24BO95487 1268 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 SUPT20HL2P0C7V6 817 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms