RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 LRFN2Q9ULH4 789 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 ZMIZ1Q9ULJ6 1067 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 STRIP2Q9ULQ0 834 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 NENFQ9UMX5 172 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 INPP5FQ9Y2H2 1132 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 MRFAP1Q9Y605 127 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 A0A0U1RQF3 1178 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 FAM170AA1A519 330 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 CTAGE15A4D2H0 777 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 TMEM110-MUSTN1A8MSY1 372 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 A8MXQ7 604 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 KPNA7A9QM74 516 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 M0QYV0 167 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 MEFVO15553 781 aaPredicted RBP8.57□□□□□ -1.04
HTT-209ENST00000512068 ZNF623O75123 536 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 CILPO75339 1184 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 FTCDO95954 541 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 CYP1A1P04798 512 aaPredicted RBP8.57□□□□□ -1.04
HTT-209ENST00000512068 ATP1A1P05023 1023 aaKnown RBP8.57□□□□□ -1.04
HTT-209ENST00000512068 CTAGE8P0CG41 777 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 DESP17661 470 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 PAX3P23760 479 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 DNA2P51530 1060 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 ZNF132P52740 706 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 NDST1P52848 882 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 CDH8P55286 799 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 CENPCQ03188 943 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 INCA1Q0VD86 236 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 GRIK3Q13003 919 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 ZBTB6Q15916 424 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 XKR4Q5GH76 650 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 PAPD7Q5XG87 772 aaKnown RBP8.57□□□□□ -1.04
HTT-209ENST00000512068 GLB1LQ6UWU2 654 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 DSTYKQ6XUX3 929 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 MRPL10Q7Z7H8 261 aaKnown RBP8.57□□□□□ -1.04
HTT-209ENST00000512068 CTAGE6Q86UF2 777 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 UNC93AQ86WB7 457 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 METTL23Q86XA0 190 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 CTAGE4Q8IX94 777 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 FAM126BQ8IXS8 530 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 ABI1Q8IZP0 508 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 CRIPAKQ8N1N5 446 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 UBL4BQ8N7F7 174 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 UBR7Q8N806 425 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 TPCN2Q8NHX9 752 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 ZNF564Q8TBZ8 553 aaPredicted RBP8.57□□□□□ -1.04
HTT-209ENST00000512068 UBE2Q2Q8WVN8 375 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 CPA5Q8WXQ8 436 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 DDX1Q92499 740 aaKnown RBP8.57□□□□□ -1.04
HTT-209ENST00000512068 UBXN4Q92575 508 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 GOLGA1Q92805 767 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 LPPQ93052 612 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 CYFIP2Q96F07 1278 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 VCPIP1Q96JH7 1222 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 RPGRIP1Q96KN7 1286 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 TNIP3Q96KP6 325 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 UROC1Q96N76 676 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 ZMAT2Q96NC0 199 aaKnown RBP8.57□□□□□ -1.04
HTT-209ENST00000512068 FAM193BQ96PV7 902 aaPredicted RBP8.57□□□□□ -1.04
HTT-209ENST00000512068 PCDHB18PQ96TA0 734 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 C11orf70Q9BRQ4 267 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 TRAIPQ9BWF2 469 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 CARD6Q9BX69 1037 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 PCDHGC5Q9Y5F6 944 aa8.57□□□□□ -1.04
HTT-209ENST00000512068 TANC1Q9C0D5 1861 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 GRID2IPA4D2P6 1211 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 ARL5CA6NH57 179 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 TMEM229AB2RXF0 380 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 PODXLO00592 558 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 PIRO00625 290 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 SPOPO43791 374 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 EOMESO95936 686 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 CALCAP01258 141 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 CYP1A2P05177 515 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 UNGP13051 313 aaPredicted RBP8.56□□□□□ -1.04
HTT-209ENST00000512068 PRLRP16471 622 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 LRPAP1P30533 357 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 RPL9P32969 192 aaKnown RBP8.56□□□□□ -1.04
HTT-209ENST00000512068 PTGIRP43119 386 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 SCNN1GP51170 649 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 RAD23BP54727 409 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 SEC13P55735 322 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 SLC8A3P57103 927 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 NOMO3P69849 1222 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 TAP1Q03518 808 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 RNASELQ05823 741 aaKnown RBP8.56□□□□□ -1.04
HTT-209ENST00000512068 DSC3Q14574 896 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 C11orf63Q6NUN7 778 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 DNAJC24Q6P3W2 148 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 SLC24A5Q71RS6 500 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 ERICH1Q86X53 443 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 DNAAF5Q86Y56 855 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 ECHDC2Q86YB7 292 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 PALB2Q86YC2 1186 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 ADGRF2Q8IZF7 708 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 MCOLN2Q8IZK6 566 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 TOP6BLQ8N6T0 577 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 C1orf131Q8NDD1 294 aaKnown RBP8.56□□□□□ -1.04
HTT-209ENST00000512068 CAPZA3Q96KX2 299 aa8.56□□□□□ -1.04
HTT-209ENST00000512068 ZFP42Q96MM3 310 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms