RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 VAMP7P51809 220 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 PMS1P54277 932 aaKnown RBP14.2□□□□□ -0.14
RNF4-215ENST00000511843 PPP3CAQ08209 521 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 ADAM9Q13443 819 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 ZACNQ401N2 412 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 SLC44A4Q53GD3 710 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 ZNF658Q5TYW1 1059 aaPredicted RBP14.2□□□□□ -0.14
RNF4-215ENST00000511843 TPRG1Q6ZUI0 275 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 SV2AQ7L0J3 742 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 ARID3BQ8IVW6 561 aaPredicted RBP14.2□□□□□ -0.14
RNF4-215ENST00000511843 FAM186BQ8IYM0 893 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 TMEM174Q8WUU8 243 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 SMARCE1Q969G3 411 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 CCDC34Q96HJ3 373 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 PCED1BQ96HM7 432 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 LRRC3BQ96PB8 259 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 BRD9Q9H8M2 597 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 ABCB6Q9NP58 842 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 MTF2Q9Y483 593 aaPredicted RBP14.2□□□□□ -0.14
RNF4-215ENST00000511843 TRIM49BA6NDI0 452 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 SLC38A8A6NNN8 435 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 A8MXQ7 604 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 CLDN5O00501 218 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 GALR2O43603 387 aaPredicted RBP14.19□□□□□ -0.14
RNF4-215ENST00000511843 TACC1O75410 805 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 TADA3O75528 432 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 STAU1O95793 577 aaKnown RBP14.19□□□□□ -0.14
RNF4-215ENST00000511843 HLA-DRAP01903 254 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 F11P03951 625 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 PTPN1P18031 435 aaKnown RBP14.19□□□□□ -0.14
RNF4-215ENST00000511843 CDC25CP30307 473 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 GDI1P31150 447 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 ATICP31939 592 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 PIK3CAP42336 1068 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 GCLMP48507 274 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 CACNA2D1P54289 1103 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 NLRP12P59046 1061 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 RPL10AP62906 217 aaKnown RBP14.19□□□□□ -0.14
RNF4-215ENST00000511843 ORC1Q13415 861 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 NFIL3Q16649 462 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 CFAP221Q4G0U5 840 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 ARHGAP15Q53QZ3 475 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 ZNF667Q5HYK9 610 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 ZFYVE19Q96K21 471 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 GSDMAQ96QA5 445 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 GCNAQ96QF7 691 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 TRMT61BQ9BVS5 477 aaKnown RBP14.19□□□□□ -0.14
RNF4-215ENST00000511843 SLC46A2Q9BY10 475 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 KCNH6Q9H252 994 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 TRPV4Q9HBA0 871 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 TMEM30AQ9NV96 361 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 RMND1Q9NWS8 449 aa14.19□□□□□ -0.14
RNF4-215ENST00000511843 MAGEC2Q9UBF1 373 aaPredicted RBP14.19□□□□□ -0.14
RNF4-215ENST00000511843 SMC2O95347 1197 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 FGF19O95750 216 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 KRT13P13646 458 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 GLULP15104 373 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 PSMC3P17980 439 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 RPL13P26373 211 aaKnown RBP14.18□□□□□ -0.14
RNF4-215ENST00000511843 AP3M2P53677 418 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 PTPN5P54829 565 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 STARD6P59095 220 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 PFKPQ01813 784 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 UBXN2BQ14CS0 331 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 TXNDC8Q6A555 127 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 ANKRD40Q6AI12 368 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 PHLDB3Q6NSJ2 640 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 C4orf50Q6ZRC1 276 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 MFSD6LQ8IWD5 586 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 MAB21L3Q8N8X9 362 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 PJA1Q8NG27 643 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 TTC8Q8TAM2 541 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 SPATA20Q8TB22 786 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 MYCBPAPQ8TBZ2 947 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 TAS1R2Q8TE23 839 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 FUBP3Q96I24 572 aaKnown RBP eCLIP14.18□□□□□ -0.14
RNF4-215ENST00000511843 TIGD1Q96MW7 591 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 B3GNT5Q9BYG0 378 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 ZNF518BQ9C0D4 1074 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 GPR88Q9GZN0 384 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 TASP1Q9H6P5 420 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 HMGXB4Q9UGU5 601 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 MAN1B1Q9UKM7 699 aa14.18□□□□□ -0.14
RNF4-215ENST00000511843 CIZ1Q9ULV3 898 aaPredicted RBP14.18□□□□□ -0.14
RNF4-215ENST00000511843 VPS13AQ96RL7 3174 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 SHISA7A6NL88 538 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 F8VP50 259 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 BIN1O00499 593 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 IKBKBO14920 756 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 MAPK13O15264 365 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 KINO60870 393 aaKnown RBP14.17□□□□□ -0.14
RNF4-215ENST00000511843 NOL4O94818 638 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 ASS1P00966 412 aaKnown RBP14.17□□□□□ -0.14
RNF4-215ENST00000511843 CSH1P0DML2 217 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 CSH2P0DML3 217 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 CD44P16070 742 aaKnown RBP14.17□□□□□ -0.14
RNF4-215ENST00000511843 PSMC2P35998 433 aaKnown RBP14.17□□□□□ -0.14
RNF4-215ENST00000511843 GRIK1P39086 918 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 MAGEA11P43364 429 aa14.17□□□□□ -0.14
RNF4-215ENST00000511843 USP46P62068 366 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms