RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 GNAI1P63096 354 aa3.79□□□□□ -1.8
SCAMP1-204ENST00000511551 KLF1Q13351 362 aaPredicted RBP3.79□□□□□ -1.8
SCAMP1-204ENST00000511551 BOP1Q14137 746 aaKnown RBP3.79□□□□□ -1.8
SCAMP1-204ENST00000511551 KIF22Q14807 665 aa3.79□□□□□ -1.8
SCAMP1-204ENST00000511551 C3orf36Q3SXR2 165 aa3.79□□□□□ -1.8
SCAMP1-204ENST00000511551 FCRL6Q6DN72 434 aa3.79□□□□□ -1.8
SCAMP1-204ENST00000511551 GIMAP6Q6P9H5 292 aa3.79□□□□□ -1.8
SCAMP1-204ENST00000511551 AMOTL1Q8IY63 956 aa3.79□□□□□ -1.8
SCAMP1-204ENST00000511551 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.79□□□□□ -1.8
SCAMP1-204ENST00000511551 DAZAP1Q96EP5 407 aaKnown RBP3.79□□□□□ -1.8
SCAMP1-204ENST00000511551 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 TLDC2A0PJX2 215 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 ABLIM3O94929 683 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 KIF20AO95235 890 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 RARBP10826 455 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 CLCN2P51788 898 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 SP2Q02086 613 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 SRSF1Q07955 248 aaKnown RBP eCLIP3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 TBC1D25Q3MII6 688 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 CERKLQ49MI3 558 aaPredicted RBP3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 KHDC1Q4VXA5 237 aaKnown RBP3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 SLC4A10Q6U841 1118 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 MTHFD1LQ6UB35 978 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 TMEM108Q6UXF1 575 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 SPATS2Q86XZ4 545 aaKnown RBP3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 ACRBPQ8NEB7 543 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 JADE3Q92613 823 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 NOTCH4Q99466 2003 aa3.78□□□□□ -1.8
SCAMP1-204ENST00000511551 USP1O94782 785 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 RPLP2P05387 115 aaKnown RBP3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 CPEP16870 476 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 C5AR1P21730 350 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 MT3P25713 68 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 FXR1P51114 621 aaKnown RBP eCLIP3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 SEMA3AQ14563 771 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 INAVAQ3KP66 663 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 KIRREL2Q6UWL6 708 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 Q6ZWC4 215 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 PIP4P1Q86T03 277 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 USP37Q86T82 979 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 TTC7BQ86TV6 843 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 LRRC71Q8N4P6 559 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 WDR66Q8TBY9 1149 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 ZNF398Q8TD17 642 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 CHAC2Q8WUX2 184 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 SNX18Q96RF0 628 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 VRK1Q99986 396 aaPredicted RBP3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 SSX2IPQ9Y2D8 614 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 TBX22Q9Y458 520 aa3.77□□□□□ -1.81
SCAMP1-204ENST00000511551 TCRBV5S1A1TA0A578 114 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 CCDC154A6NI56 674 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 PRSS44E7EML9 344 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 UBE2Q2LH0YL09 131 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 DSCR3O14972 297 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 SMAD6O43541 496 aaKnown RBP3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 KRT86O43790 486 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 A1BGP04217 495 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 FESP07332 822 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 FTH1P19P0C7X4 201 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 PRDX5P30044 214 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 KCNJ5P48544 419 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 PDE1AP54750 535 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 DSC2Q02487 901 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 HYAL1Q12794 435 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 KRT81Q14533 505 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 RNF219Q5W0B1 726 aaPredicted RBP3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 Q6ZTC4 211 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 FAM90A1Q86YD7 464 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 TERB1Q8NA31 727 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 COG1Q8WTW3 980 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 DDX17Q92841 729 aaKnown RBP3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 KAT5Q92993 513 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 COA7Q96BR5 231 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 GABRQQ9UN88 632 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 CFAP20Q9Y6A4 193 aaKnown RBP3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 TTC3P53804 2025 aa3.76□□□□□ -1.81
SCAMP1-204ENST00000511551 A1L4Q6 167 aa3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 ERVV-2B6SEH9 535 aa3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 ERC2O15083 957 aa3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 HOXD9P28356 352 aaPredicted RBP3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 PPIFP30405 207 aaKnown RBP3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 PIK3CGP48736 1102 aa3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 HTR6P50406 440 aa3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 NPY5RQ15761 445 aa3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 UBAP2Q5T6F2 1119 aaKnown RBP3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 USP43Q70EL4 1123 aa3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 ABHD11Q8NFV4 315 aa3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 GLG1Q92896 1179 aa3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 CTAGE1Q96RT6 745 aa3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 HIPK2Q9H2X6 1198 aa3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 FOXP1Q9H334 677 aaPredicted RBP3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 ZDHHC8Q9ULC8 765 aa3.75□□□□□ -1.81
SCAMP1-204ENST00000511551 EME2A4GXA9 379 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-204ENST00000511551 FZD9O00144 591 aa3.74□□□□□ -1.81
SCAMP1-204ENST00000511551 GTPBP1O00178 669 aaKnown RBP3.74□□□□□ -1.81
SCAMP1-204ENST00000511551 ADAM10O14672 748 aa3.74□□□□□ -1.81
SCAMP1-204ENST00000511551 TOMM40O96008 361 aa3.74□□□□□ -1.81
SCAMP1-204ENST00000511551 KRT10P13645 584 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms