RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 SDCBP2Q9H190 292 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 DPEP3Q9H4B8 488 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 SLITRK6Q9H5Y7 841 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 MAGEC2Q9UBF1 373 aaPredicted RBP12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 MAN1B1Q9UKM7 699 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 KMT2EQ8IZD2 1858 aa12.41□□□□□ -0.42
SH3RF1-205ENST00000511421 CETN3O15182 167 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 NOL4O94818 638 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 ASS1P00966 412 aaKnown RBP12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 HLA-DRAP01903 254 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 KRT13P13646 458 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 PTPN1P18031 435 aaKnown RBP12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 AOC1P19801 751 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 WEE1P30291 646 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 RAP1GAPP47736 663 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 GCLMP48507 274 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 NLRP12P59046 1061 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 CYP4F8P98187 520 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 GRM2Q14416 872 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 MAPRE1Q15691 268 aaKnown RBP12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 TAF12Q16514 161 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 SLC44A4Q53GD3 710 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 MDH1BQ5I0G3 518 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 GPR158Q5T848 1215 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 ANKRD40Q6AI12 368 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 PHLDB3Q6NSJ2 640 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 VSTM1Q6UX27 236 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 ARID3BQ8IVW6 561 aaPredicted RBP12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 TAF4BQ92750 862 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 MYRFLQ96LU7 910 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 TASP1Q9H6P5 420 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 TBC1D17Q9HA65 648 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 WDFY4Q6ZS81 3184 aa12.4□□□□□ -0.42
SH3RF1-205ENST00000511421 SLC38A8A6NNN8 435 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 HEPACAM2A8MVW5 462 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 A8MXQ7 604 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 CD44P16070 742 aaKnown RBP12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 PSMC3P17980 439 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 BMP6P22004 513 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 BDNFP23560 247 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 PLA2G5P39877 138 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 NUBP1P53384 320 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 STARD6P59095 220 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 PFKPQ01813 784 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 TCF15Q12870 199 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 ARHGAP15Q53QZ3 475 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 ISM2Q6H9L7 571 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 SPOPLQ6IQ16 392 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 SCARA5Q6ZMJ2 495 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 GPIHBP1Q8IV16 184 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 MFSD6LQ8IWD5 586 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 SCN4BQ8IWT1 228 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 TAS1R2Q8TE23 839 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 TRMT2BQ96GJ1 504 aaKnown RBP12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 LRRC3BQ96PB8 259 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 PRRX2Q99811 253 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 DDX23Q9BUQ8 820 aaKnown RBP12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 TRMT61BQ9BVS5 477 aaKnown RBP12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 SLC46A2Q9BY10 475 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 F5P12259 2224 aa12.39□□□□□ -0.43
SH3RF1-205ENST00000511421 TRIM49BA6NDI0 452 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 LRRN2O75325 713 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 TADA3O75528 432 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 CCNE1P24864 410 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 GTF2H1P32780 548 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 ANP32AP39687 249 aaKnown RBP12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 PIK3CAP42336 1068 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 ASPAP45381 313 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 UBE2HP62256 183 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 FKBP3Q00688 224 aaKnown RBP12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 CYP27A1Q02318 531 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 MLF2Q15773 248 aaPredicted RBP12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 B3GALNT2Q8NCR0 500 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 DEPDC1BQ8WUY9 529 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 E2F7Q96AV8 911 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 SPATA17Q96L03 361 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 GCNAQ96QF7 691 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 TSG101Q99816 390 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 B3GNT5Q9BYG0 378 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 APOBEC3GQ9HC16 384 aaKnown RBP12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 TMEM8AQ9HCN3 771 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 TMEM30AQ9NV96 361 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 MAGED2Q9UNF1 606 aaPredicted RBP12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 SHISA7A6NL88 538 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 PPP1R3GB7ZBB8 358 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 SLC16A3O15427 465 aaKnown RBP12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 PRAMEF12O95522 483 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 EPB41P11171 864 aaKnown RBP12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 P4HA1P13674 534 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 GDI1P31150 447 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 GRIK1P39086 918 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 CACNA2D1P54289 1103 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 PRKCQQ04759 706 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 LRRC63Q05C16 580 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 FCHO2Q0JRZ9 810 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 MORC3Q14149 939 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 KRT39Q6A163 491 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 DNASE1L2Q92874 299 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms