RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 A0A1W2PRU2 124 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 ATG7O95352 703 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 DHPSP49366 369 aaPredicted RBP13.14□□□□□ -0.31
LIN54-210ENST00000510877 RGS19P49795 217 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 CAP1Q01518 475 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 MAN2A1Q16706 1144 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 ICE2Q659A1 982 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 FAM76AQ8TAV0 307 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 GDAP1Q8TB36 358 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 TEX28O15482 410 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 CFIP05156 583 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 GCKP35557 465 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 MYL6P60660 151 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 TUBB2AQ13885 445 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 DDR2Q16832 855 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 SFMBT2Q5VUG0 894 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 ZNF280BQ86YH2 543 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 ATP6V0D2Q8N8Y2 350 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 ST13P5Q8NFI4 369 aaPredicted RBP13.14□□□□□ -0.31
LIN54-210ENST00000510877 PDCD6IPQ8WUM4 868 aaKnown RBP13.14□□□□□ -0.31
LIN54-210ENST00000510877 PCYT2Q99447 389 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 TUBB2BQ9BVA1 445 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 JRKLQ9Y4A0 524 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 MAP1BP46821 2468 aaKnown RBP13.14□□□□□ -0.31
LIN54-210ENST00000510877 LCHNA4D1U4 455 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 NFICP08651 508 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 EPCAMP16422 314 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 C1orf186Q6ZWK4 172 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.14□□□□□ -0.31
LIN54-210ENST00000510877 TRMT11Q7Z4G4 463 aaKnown RBP13.14□□□□□ -0.31
LIN54-210ENST00000510877 LMNTD2Q8IXW0 634 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 ZNF461Q8TAF7 563 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 TUBGCP2Q9BSJ2 902 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 YBX2Q9Y2T7 364 aaKnown RBP13.14□□□□□ -0.31
LIN54-210ENST00000510877 MYH1P12882 1939 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.14□□□□□ -0.31
LIN54-210ENST00000510877 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.14□□□□□ -0.31
LIN54-210ENST00000510877 IFFO1Q0D2I5 559 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 ZNF177Q13360 481 aaPredicted RBP13.14□□□□□ -0.31
LIN54-210ENST00000510877 USP49Q70CQ1 688 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 DSG4Q86SJ6 1040 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 SIX5Q8N196 739 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 TMEM161BQ8NDZ6 487 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 SPPL3Q8TCT6 385 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 TMA16Q96EY4 203 aaKnown RBP13.14□□□□□ -0.31
LIN54-210ENST00000510877 KXD1Q9BQD3 176 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 BBS2Q9BXC9 721 aa13.14□□□□□ -0.31
LIN54-210ENST00000510877 EP400Q96L91 3159 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 PIK3R2O00459 728 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 DHX15O43143 795 aaKnown RBP13.13□□□□□ -0.31
LIN54-210ENST00000510877 NLRP12P59046 1061 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 SDHAF4Q5VUM1 108 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 PASD1Q8IV76 773 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 SLC39A11Q8N1S5 342 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 GPR152Q8TDT2 470 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 KLHL5Q96PQ7 755 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 RBSNQ9H1K0 784 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 TMEM8AQ9HCN3 771 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.13□□□□□ -0.31
LIN54-210ENST00000510877 CNPP09543 421 aaKnown RBP13.13□□□□□ -0.31
LIN54-210ENST00000510877 C6orf163Q5TEZ5 329 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 RTP3Q9BQQ7 232 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 NUCKS1Q9H1E3 243 aaKnown RBP13.13□□□□□ -0.31
LIN54-210ENST00000510877 CYP3A43Q9HB55 503 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 EPHB4P54760 987 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 TDGQ13569 410 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 GOLGA7BQ2TAP0 167 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 UNC45BQ8IWX7 931 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 CARNMT1Q8N4J0 409 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 RPRD1AQ96P16 312 aaPredicted RBP13.13□□□□□ -0.31
LIN54-210ENST00000510877 NUP58Q9BVL2 599 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 LZTS1Q9Y250 596 aa13.13□□□□□ -0.31
LIN54-210ENST00000510877 F8VP50 259 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 PRPSAP2O60256 369 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 RFPL2O75678 378 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 TPRG1Q6ZUI0 275 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 BPIFB1Q8TDL5 484 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 SLC22A17Q8WUG5 538 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 OLFML3Q9NRN5 406 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 OLA1Q9NTK5 396 aaKnown RBP13.12□□□□□ -0.31
LIN54-210ENST00000510877 FBXL5Q9UKA1 691 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 NRXN2Q9P2S2 1712 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 F5H5T6 163 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 MAP3K7O43318 606 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 GNSP15586 552 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 RABGAP1LQ5R372 815 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 SPATS2Q86XZ4 545 aaKnown RBP13.12□□□□□ -0.31
LIN54-210ENST00000510877 ERLEC1Q96DZ1 483 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 SLC25A13Q9UJS0 675 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 KIAA1257Q9ULG3 409 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 TTC28Q96AY4 2481 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 PTPN1P18031 435 aaKnown RBP13.12□□□□□ -0.31
LIN54-210ENST00000510877 NOVP48745 357 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 GRM2Q14416 872 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 VSTM1Q6UX27 236 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 EPC1Q9H2F5 836 aa13.12□□□□□ -0.31
LIN54-210ENST00000510877 XPNPEP1Q9NQW7 623 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms