RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 ARHGAP40Q5TG30 622 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 MORN5Q5VZ52 161 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 C11orf87Q6NUJ2 197 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 C9orf106Q8NAJ2 232 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 ZCRB1Q8TBF4 217 aaKnown RBP6.43□□□□□ -1.38
NUP54-209ENST00000510569 HPS3Q969F9 1004 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 MTFMTQ96DP5 389 aaKnown RBP6.43□□□□□ -1.38
NUP54-209ENST00000510569 BRINP2Q9C0B6 783 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 BTBD3Q9Y2F9 522 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 QSOX1O00391 747 aa6.42□□□□□ -1.38
NUP54-209ENST00000510569 TJP3O95049 919 aa6.42□□□□□ -1.38
NUP54-209ENST00000510569 GRPP07492 148 aa6.42□□□□□ -1.38
NUP54-209ENST00000510569 PRAMEF17Q5VTA0 474 aa6.42□□□□□ -1.38
NUP54-209ENST00000510569 RP9Q8TA86 221 aaKnown RBP6.42□□□□□ -1.38
NUP54-209ENST00000510569 MOGAT1Q96PD6 335 aa6.42□□□□□ -1.38
NUP54-209ENST00000510569 PUS7Q96PZ0 661 aaKnown RBP6.42□□□□□ -1.38
NUP54-209ENST00000510569 MED16Q9Y2X0 877 aa6.42□□□□□ -1.38
NUP54-209ENST00000510569 ADAMTS3O15072 1205 aa6.41□□□□□ -1.38
NUP54-209ENST00000510569 NEK2P51955 445 aa6.41□□□□□ -1.38
NUP54-209ENST00000510569 CYP4F2P78329 520 aa6.41□□□□□ -1.38
NUP54-209ENST00000510569 KLF9Q13886 244 aaPredicted RBP6.41□□□□□ -1.38
NUP54-209ENST00000510569 AMOTQ4VCS5 1084 aa6.41□□□□□ -1.38
NUP54-209ENST00000510569 CCDC157Q569K6 752 aa6.41□□□□□ -1.38
NUP54-209ENST00000510569 ATAT1Q5SQI0 421 aa6.41□□□□□ -1.38
NUP54-209ENST00000510569 RGS7BPQ6MZT1 257 aaPredicted RBP6.41□□□□□ -1.38
NUP54-209ENST00000510569 PCSK9Q8NBP7 692 aaKnown RBP6.41□□□□□ -1.38
NUP54-209ENST00000510569 MAP3K14Q99558 947 aa6.41□□□□□ -1.38
NUP54-209ENST00000510569 GLOD4Q9HC38 313 aa6.41□□□□□ -1.38
NUP54-209ENST00000510569 SARS2Q9NP81 518 aaKnown RBP6.41□□□□□ -1.38
NUP54-209ENST00000510569 SHOC2Q9UQ13 582 aa6.41□□□□□ -1.38
NUP54-209ENST00000510569 STXBP5LQ9Y2K9 1186 aa6.41□□□□□ -1.38
NUP54-209ENST00000510569 PPP6CO00743 305 aa6.4□□□□□ -1.38
NUP54-209ENST00000510569 TUBB4AP04350 444 aa6.4□□□□□ -1.38
NUP54-209ENST00000510569 ALDH2P05091 517 aa6.4□□□□□ -1.38
NUP54-209ENST00000510569 FESP07332 822 aa6.4□□□□□ -1.38
NUP54-209ENST00000510569 KHDC1LQ5JSQ8 128 aa6.4□□□□□ -1.38
NUP54-209ENST00000510569 PCID2Q5JVF3 399 aa6.4□□□□□ -1.38
NUP54-209ENST00000510569 YTHDF3Q7Z739 585 aaKnown RBP6.4□□□□□ -1.38
NUP54-209ENST00000510569 CELF5Q8N6W0 485 aaKnown RBP6.4□□□□□ -1.38
NUP54-209ENST00000510569 PLBD2Q8NHP8 589 aa6.4□□□□□ -1.38
NUP54-209ENST00000510569 RPL36ALQ969Q0 106 aaKnown RBP6.4□□□□□ -1.38
NUP54-209ENST00000510569 SLC12A5Q9H2X9 1139 aa6.4□□□□□ -1.38
NUP54-209ENST00000510569 NRIP3Q9NQ35 241 aa6.4□□□□□ -1.38
NUP54-209ENST00000510569 NDRG4Q9ULP0 352 aaKnown RBP6.4□□□□□ -1.38
NUP54-209ENST00000510569 PCDHA6Q9UN73 950 aa6.4□□□□□ -1.38
NUP54-209ENST00000510569 ADAMTS5Q9UNA0 930 aa6.4□□□□□ -1.38
NUP54-209ENST00000510569 A1L4Q6 167 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 PRRT4C9JH25 899 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 PROB1E7EW31 1015 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 SMIM22K7EJ46 135 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 ABLIM3O94929 683 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 NPSP0C0P6 89 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 ENGP17813 658 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 PTGER1P34995 402 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 KCNJ5P48544 419 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 E2F2Q14209 437 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 CEP78Q5JTW2 689 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 LRRC71Q8N4P6 559 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 ZNF366Q8N895 744 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 GLG1Q92896 1179 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 MRGPRX1Q96LB2 322 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 CGRRF1Q99675 332 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 XPR1Q9UBH6 696 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 GABRQQ9UN88 632 aa6.39□□□□□ -1.39
NUP54-209ENST00000510569 MPGP29372 298 aa6.38□□□□□ -1.39
NUP54-209ENST00000510569 WNT3P56703 355 aa6.38□□□□□ -1.39
NUP54-209ENST00000510569 HOXA4Q00056 320 aaPredicted RBP6.38□□□□□ -1.39
NUP54-209ENST00000510569 MAPK7Q13164 816 aa6.38□□□□□ -1.39
NUP54-209ENST00000510569 SUPT20HL1Q3ZLR7 823 aa6.38□□□□□ -1.39
NUP54-209ENST00000510569 SLC18B1Q6NT16 456 aa6.38□□□□□ -1.39
NUP54-209ENST00000510569 TRIM72Q6ZMU5 477 aa6.38□□□□□ -1.39
NUP54-209ENST00000510569 Q6ZWC4 215 aa6.38□□□□□ -1.39
NUP54-209ENST00000510569 PARS2Q7L3T8 475 aaKnown RBP6.38□□□□□ -1.39
NUP54-209ENST00000510569 SOCS4Q8WXH5 440 aa6.38□□□□□ -1.39
NUP54-209ENST00000510569 C1GALT1C1Q96EU7 318 aa6.38□□□□□ -1.39
NUP54-209ENST00000510569 MACROD1Q9BQ69 325 aa6.38□□□□□ -1.39
NUP54-209ENST00000510569 THAP7Q9BT49 309 aaPredicted RBP6.38□□□□□ -1.39
NUP54-209ENST00000510569 ANKRD6Q9Y2G4 727 aa6.38□□□□□ -1.39
NUP54-209ENST00000510569 H7C1Q1 480 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 MOSPD3O75425 235 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 THP07101 528 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 CSF1RP07333 972 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 CYP2D6P10635 497 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 PF4V1P10720 104 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 CYP2C9P11712 490 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 LRPAP1P30533 357 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 PDE6CP51160 858 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 UCP3P55916 312 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 TPTEP56180 551 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 RAB1AP62820 205 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 ETFDHQ16134 617 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 GRAMD1CQ8IYS0 662 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 CYP2W1Q8TAV3 490 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 R3HDM4Q96D70 268 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 HOOK2Q96ED9 719 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 MESP1Q9BRJ9 268 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 QTRT1Q9BXR0 403 aaKnown RBP6.37□□□□□ -1.39
NUP54-209ENST00000510569 BHMT2Q9H2M3 363 aa6.37□□□□□ -1.39
NUP54-209ENST00000510569 A0A088AWK7 358 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 OFD1O75665 1012 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms