RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 APPL2Q8NEU8 664 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 MDGA1Q8NFP4 955 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 NCOA7Q8NI08 942 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 OTUD7AQ8TE49 926 aaPredicted RBP4.23□□□□□ -1.73
RNF4-211ENST00000509206 HMGB4Q8WW32 186 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 CHFRQ96EP1 664 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 MED8Q96G25 268 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 TMEM176AQ96HP8 235 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 UROC1Q96N76 676 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 LRRC3BQ96PB8 259 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 FNBP1Q96RU3 617 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 MAP3K14Q99558 947 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 TASP1Q9H6P5 420 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 SENP2Q9HC62 589 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 CAPN10Q9HC96 672 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 FBRSL1Q9HCM7 1045 aaKnown RBP4.23□□□□□ -1.73
RNF4-211ENST00000509206 AFF4Q9UHB7 1163 aaKnown RBP4.23□□□□□ -1.73
RNF4-211ENST00000509206 DCTN4Q9UJW0 460 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 PCOLCE2Q9UKZ9 415 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 CELSR3Q9NYQ7 3312 aa4.23□□□□□ -1.73
RNF4-211ENST00000509206 COL6A6A6NMZ7 2263 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 HIP1O00291 1037 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 LCE2BO14633 110 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 CAPN5O15484 640 aaPredicted RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 FLRT2O43155 660 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 TNFSF14O43557 240 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 TLX3O43711 291 aaPredicted RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 FAM13AO94988 1023 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 KLF8O95600 359 aaPredicted RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 CER1O95813 267 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 CYP3A4P08684 503 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 MYF5P13349 255 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 ARSAP15289 507 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 ARF4P18085 180 aaPredicted RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 SDSP20132 328 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 CDC25CP30307 473 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 GJA4P35212 333 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 MATKP42679 507 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 BRCC3P46736 316 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 CLCNKBP51801 687 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 EPHA5P54756 1037 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 TMPRSS3P57727 454 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 PTENP60484 403 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 PSMC5P62195 406 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 MRPS21P82921 87 aaKnown RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 CBLBQ13191 982 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 MXD4Q14582 209 aaPredicted RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 VEPH1Q14D04 833 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 UGCGQ16739 394 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 EOGTQ5NDL2 527 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 ANKRD45Q5TZF3 282 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 PLA2G4FQ68DD2 849 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 IL27RAQ6UWB1 636 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 DHRS13Q6UX07 377 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 DNAJB7Q7Z6W7 309 aaPredicted RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 FERMT3Q86UX7 667 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 SPACA3Q8IXA5 215 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 FRMD1Q8N878 549 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 ZNF513Q8N8E2 541 aaPredicted RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 TRIML1Q8N9V2 468 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 TXNDC5Q8NBS9 432 aaKnown RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 DAGLBQ8NCG7 672 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 RDM1Q8NG50 284 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 NAF1Q96HR8 494 aaKnown RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 HSPA12BQ96MM6 686 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 CCDC43Q96MW1 224 aaKnown RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 RIT2Q99578 217 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 FAM83CQ9BQN1 747 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 ADPGKQ9BRR6 497 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 ESYT1Q9BSJ8 1104 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 DSCC1Q9BVC3 393 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 C2orf49Q9BVC5 232 aaPredicted RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 SEMA4CQ9C0C4 833 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 SMG9Q9H0W8 520 aaKnown RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 MIR1-1HGQ9H1L0 117 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 UNC45AQ9H3U1 944 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 GAREM1Q9H706 876 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 C6orf50Q9HD87 102 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 TM7SF3Q9NS93 570 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 DUS2Q9NX74 493 aaKnown RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 ZMYM5Q9UJ78 669 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 FBXL5Q9UKA1 691 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 MMP17Q9ULZ9 603 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.22□□□□□ -1.73
RNF4-211ENST00000509206 GDAQ9Y2T3 454 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 ASB3Q9Y575 518 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 SLC12A7Q9Y666 1083 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 DOPEY1Q5JWR5 2465 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 NOTCH4Q99466 2003 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 TEX15Q9BXT5 2789 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 KNTC1P50748 2209 aa4.22□□□□□ -1.73
RNF4-211ENST00000509206 MYH9P35579 1960 aaKnown RBP4.22□□□□□ -1.73
RNF4-211ENST00000509206 NCANO14594 1321 aa4.21□□□□□ -1.73
RNF4-211ENST00000509206 PLXNB3Q9ULL4 1909 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 PI4KAP42356 2102 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 IGLV3-22A0A075B6J6 115 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 A0A1B0GTW7 788 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 A0A1B0GUA9 196 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 TCRBV21S2A2A0A5A6 115 aa4.21□□□□□ -1.74
RNF4-211ENST00000509206 MYMKA6NI61 221 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 218.6 ms