RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 RPL10AP62906 217 aaKnown RBP23.64■■□□□ 1.37
PACRGL-220ENST00000508952 TTC8Q8TAM2 541 aa23.64■■□□□ 1.37
PACRGL-220ENST00000508952 PLEKHO2Q8TD55 490 aa23.64■■□□□ 1.37
PACRGL-220ENST00000508952 FAM3CQ92520 227 aa23.64■■□□□ 1.37
PACRGL-220ENST00000508952 CRTAC1Q9NQ79 661 aa23.64■■□□□ 1.37
PACRGL-220ENST00000508952 USP25Q9UHP3 1055 aa23.64■■□□□ 1.37
PACRGL-220ENST00000508952 PTPRZ1P23471 2315 aaPredicted RBP23.64■■□□□ 1.37
PACRGL-220ENST00000508952 PTPRDP23468 1912 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 PDGFRBP09619 1106 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 WARSP23381 471 aaKnown RBP23.63■■□□□ 1.37
PACRGL-220ENST00000508952 CCNE1P24864 410 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 WEE1P30291 646 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 RPS9P46781 194 aaKnown RBP23.63■■□□□ 1.37
PACRGL-220ENST00000508952 NDUFA8P51970 172 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 CFAP221Q4G0U5 840 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 TXNDC8Q6A555 127 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 FAM171BQ6P995 826 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 SCN4BQ8IWT1 228 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 CMTM8Q8IZV2 173 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 MAB21L3Q8N8X9 362 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 MYLPFQ96A32 169 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 MRPL45Q9BRJ2 306 aaKnown RBP23.63■■□□□ 1.37
PACRGL-220ENST00000508952 OBP2AQ9NY56 170 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 CDH9Q9ULB4 789 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 FRYLO94915 3013 aa23.63■■□□□ 1.37
PACRGL-220ENST00000508952 SYKP43405 635 aa23.62■■□□□ 1.37
PACRGL-220ENST00000508952 KPNA1P52294 538 aaPredicted RBP23.62■■□□□ 1.37
PACRGL-220ENST00000508952 PSMD2Q13200 908 aa23.62■■□□□ 1.37
PACRGL-220ENST00000508952 ARHGAP29Q52LW3 1261 aa23.62■■□□□ 1.37
PACRGL-220ENST00000508952 GOLGA5Q8TBA6 731 aa23.62■■□□□ 1.37
PACRGL-220ENST00000508952 BPIFB1Q8TDL5 484 aa23.62■■□□□ 1.37
PACRGL-220ENST00000508952 FUBP3Q96I24 572 aaKnown RBP eCLIP23.62■■□□□ 1.37
PACRGL-220ENST00000508952 GTSE1Q9NYZ3 720 aa23.62■■□□□ 1.37
PACRGL-220ENST00000508952 CCL26Q9Y258 94 aa23.62■■□□□ 1.37
PACRGL-220ENST00000508952 NME7Q9Y5B8 376 aa23.62■■□□□ 1.37
PACRGL-220ENST00000508952 GREB1Q4ZG55 1949 aa23.62■■□□□ 1.37
PACRGL-220ENST00000508952 TADA3O75528 432 aa23.61■■□□□ 1.37
PACRGL-220ENST00000508952 NOL4O94818 638 aa23.61■■□□□ 1.37
PACRGL-220ENST00000508952 RPN1P04843 607 aaKnown RBP23.61■■□□□ 1.37
PACRGL-220ENST00000508952 PRR29P0C7W0 189 aa23.61■■□□□ 1.37
PACRGL-220ENST00000508952 MYL6P60660 151 aa23.61■■□□□ 1.37
PACRGL-220ENST00000508952 TNNC1P63316 161 aa23.61■■□□□ 1.37
PACRGL-220ENST00000508952 CSTF1Q05048 431 aaKnown RBP23.61■■□□□ 1.37
PACRGL-220ENST00000508952 TNK2Q07912 1038 aa23.61■■□□□ 1.37
PACRGL-220ENST00000508952 MTAPQ13126 283 aa23.61■■□□□ 1.37
PACRGL-220ENST00000508952 WDR72Q3MJ13 1102 aa23.61■■□□□ 1.37
PACRGL-220ENST00000508952 C4orf50Q6ZRC1 276 aa23.61■■□□□ 1.37
PACRGL-220ENST00000508952 MRPS31Q92665 395 aaKnown RBP23.61■■□□□ 1.37
PACRGL-220ENST00000508952 KCTD10Q9H3F6 313 aa23.61■■□□□ 1.37
PACRGL-220ENST00000508952 FBXO4Q9UKT5 387 aa23.61■■□□□ 1.37
PACRGL-220ENST00000508952 LRRIQ3A6PVS8 624 aaPredicted RBP23.6■■□□□ 1.37
PACRGL-220ENST00000508952 AVPR1AP37288 418 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 CYP27A1Q02318 531 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 TRPC3Q13507 836 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 ZC3H14Q6PJT7 736 aaKnown RBP23.6■■□□□ 1.37
PACRGL-220ENST00000508952 ADSSL1Q8N142 457 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 CELF5Q8N6W0 485 aaKnown RBP23.6■■□□□ 1.37
PACRGL-220ENST00000508952 FSIP1Q8NA03 581 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 USP13Q92995 863 aaPredicted RBP23.6■■□□□ 1.37
PACRGL-220ENST00000508952 TRMT2BQ96GJ1 504 aaKnown RBP23.6■■□□□ 1.37
PACRGL-220ENST00000508952 XYLT2Q9H1B5 865 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 SNX25Q9H3E2 840 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 GOLPH3LQ9H4A5 285 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 LMAN1LQ9HAT1 526 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 GDPD2Q9HCC8 539 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 DMAC2Q9NW81 257 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 MAGEC2Q9UBF1 373 aaPredicted RBP23.6■■□□□ 1.37
PACRGL-220ENST00000508952 UXTQ9UBK9 157 aaPredicted RBP23.6■■□□□ 1.37
PACRGL-220ENST00000508952 NXF1Q9UBU9 619 aaKnown RBP23.6■■□□□ 1.37
PACRGL-220ENST00000508952 ZMYM5Q9UJ78 669 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 ATP6V1DQ9Y5K8 247 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 ANAPC1Q9H1A4 1944 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 ZNF292O60281 2723 aa23.6■■□□□ 1.37
PACRGL-220ENST00000508952 GVINP1Q7Z2Y8 2422 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 FAM237AA0A1B0GTK4 181 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 PHACTR2O75167 634 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 MYL1P05976 194 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 BDNFP23560 247 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 DDX6P26196 483 aaKnown RBP eCLIP23.59■■□□□ 1.37
PACRGL-220ENST00000508952 GNL1P36915 607 aaPredicted RBP23.59■■□□□ 1.37
PACRGL-220ENST00000508952 MAGEA11P43364 429 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 BIRC3Q13489 604 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 MDH1BQ5I0G3 518 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 TDRD10Q5VZ19 366 aaKnown RBP23.59■■□□□ 1.37
PACRGL-220ENST00000508952 TSSK4Q6SA08 328 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 MON1AQ86VX9 555 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 OR6B3Q8NGW1 331 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 PARD3BQ8TEW8 1205 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 ELMO3Q96BJ8 720 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 MYRFLQ96LU7 910 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 SCAND2PQ9GZW5 306 aaPredicted RBP23.59■■□□□ 1.37
PACRGL-220ENST00000508952 CHRDQ9H2X0 955 aa23.59■■□□□ 1.37
PACRGL-220ENST00000508952 C8orf33Q9H7E9 229 aaPredicted RBP23.59■■□□□ 1.37
PACRGL-220ENST00000508952 SPECC1L-ADORA2AF8WAN1 911 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 PDXKO00764 312 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 TACC1O75410 805 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 CLSTN1O94985 981 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 LMNAP02545 664 aaKnown RBP23.58■■□□□ 1.37
PACRGL-220ENST00000508952 NR3C1P04150 777 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 MLLT6P55198 1093 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms