RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 R3HCC1Q9Y3T6 440 aaKnown RBP19.41■□□□□ 0.7
CLDND1-220ENST00000508902 TMEM221A6NGB7 291 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 M0R296 226 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 CLDN5O00501 218 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 FAM163BP0C2L3 166 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 PTPN1P18031 435 aaKnown RBP19.4■□□□□ 0.7
CLDND1-220ENST00000508902 GTF2H1P32780 548 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 TUFMP49411 452 aaKnown RBP19.4■□□□□ 0.7
CLDND1-220ENST00000508902 SIGLEC14Q08ET2 396 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 PLD1Q13393 1074 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 TDGQ13569 410 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 SGSM1Q2NKQ1 1148 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 DPCR1Q3MIW9 517 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 DCAF17Q5H9S7 520 aaPredicted RBP19.4■□□□□ 0.7
CLDND1-220ENST00000508902 FAM78AQ5JUQ0 283 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 KRT39Q6A163 491 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 MYCBPAPQ8TBZ2 947 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 CEP63Q96MT8 703 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 ARID3AQ99856 593 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 KXD1Q9BQD3 176 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 C1QTNF1Q9BXJ1 281 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 B3GNT5Q9BYG0 378 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 ZNF518BQ9C0D4 1074 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 SNX25Q9H3E2 840 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 IGSF9Q9P2J2 1179 aa19.4■□□□□ 0.7
CLDND1-220ENST00000508902 MICAL2O94851 1124 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 BDNFP23560 247 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 CYP4F8P98187 520 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 STIM1Q13586 685 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 TMEM31Q5JXX7 168 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 TANGO2Q6ICL3 276 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 IQCEQ6IPM2 695 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 FILIP1Q7Z7B0 1213 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 IRF2BP1Q8IU81 584 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 B3GALNT2Q8NCR0 500 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 TAF4BQ92750 862 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 TATDN2Q93075 761 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 FUBP3Q96I24 572 aaKnown RBP eCLIP19.39■□□□□ 0.69
CLDND1-220ENST00000508902 NUP62CLQ9H1M0 184 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 ARMCX3Q9UH62 379 aaPredicted RBP19.39■□□□□ 0.69
CLDND1-220ENST00000508902 COQ4Q9Y3A0 265 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 ASB3Q9Y575 518 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 ZFP37Q9Y6Q3 630 aaPredicted RBP19.39■□□□□ 0.69
CLDND1-220ENST00000508902 MYH10P35580 1976 aa19.39■□□□□ 0.69
CLDND1-220ENST00000508902 A8MXQ7 604 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 NOL4O94818 638 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 F11P03951 625 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 GABRR2P28476 465 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 PPP1R2P41236 205 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 MAGEA11P43364 429 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 NDST1P52848 882 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 USP46P62068 366 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 INCA1Q0VD86 236 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 TCERG1LQ5VWI1 586 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 FRMD5Q7Z6J6 570 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 SPATA2LQ8IUW3 424 aaPredicted RBP19.38■□□□□ 0.69
CLDND1-220ENST00000508902 ELMOD1Q8N336 334 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 ASB16Q96NS5 453 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 NIF3L1Q9GZT8 377 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 GDE1Q9NZC3 331 aa19.38■□□□□ 0.69
CLDND1-220ENST00000508902 SLC38A8A6NNN8 435 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 PRR33A8MZF0 331 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 ZNF197O14709 1029 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 CYP27A1Q02318 531 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 CYP4A22Q5TCH4 519 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 RBM43Q6ZSC3 357 aaKnown RBP19.37■□□□□ 0.69
CLDND1-220ENST00000508902 ACOT1Q86TX2 421 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 GPIHBP1Q8IV16 184 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 TRIM59Q8IWR1 403 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 FUKQ8N0W3 1084 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 FBXL13Q8NEE6 735 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 LMO3Q8TAP4 145 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 RIN3Q8TB24 985 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 LRRC3BQ96PB8 259 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 GBP4Q96PP9 640 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 ELOVL4Q9GZR5 314 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 RAB20Q9NX57 234 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 RWDD2AQ9UIY3 292 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 TICRRQ7Z2Z1 1910 aa19.37■□□□□ 0.69
CLDND1-220ENST00000508902 HELZP42694 1942 aaKnown RBP19.36■□□□□ 0.69
CLDND1-220ENST00000508902 CILPO75339 1184 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 PRAMEF12O95522 483 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 CCDC130P13994 396 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 VIPR2P41587 438 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 FMO5P49326 533 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 MARSP56192 900 aaKnown RBP19.36■□□□□ 0.69
CLDND1-220ENST00000508902 NLRP12P59046 1061 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 FAM35AQ86V20 835 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 SCN4BQ8IWT1 228 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 UBALD2Q8IYN6 164 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 UBR7Q8N806 425 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 C12orf29Q8N999 325 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 LEMD2Q8NC56 503 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 ZMIZ2Q8NF64 920 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 FAM200AQ8TCP9 573 aa19.36■□□□□ 0.69
CLDND1-220ENST00000508902 SRRTQ9BXP5 876 aaKnown RBP19.36■□□□□ 0.69
CLDND1-220ENST00000508902 MAGEC2Q9UBF1 373 aaPredicted RBP19.36■□□□□ 0.69
CLDND1-220ENST00000508902 BICDL2A1A5D9 508 aa19.35■□□□□ 0.69
CLDND1-220ENST00000508902 KRBA1A5PL33 1030 aa19.35■□□□□ 0.69
CLDND1-220ENST00000508902 SHISA7A6NL88 538 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms