RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.28■□□□□ 0.04
DDX41-208ENST00000507955 hCG_1818297A0A087WSY0 165 aa15.27■□□□□ 0.04
DDX41-208ENST00000507955 MICAL2O94851 1124 aa15.27■□□□□ 0.04
DDX41-208ENST00000507955 CDKN2BP42772 138 aa15.27■□□□□ 0.04
DDX41-208ENST00000507955 SLC26A2P50443 739 aa15.27■□□□□ 0.04
DDX41-208ENST00000507955 GDF10P55107 478 aa15.27■□□□□ 0.04
DDX41-208ENST00000507955 GPS1Q13098 491 aa15.27■□□□□ 0.04
DDX41-208ENST00000507955 SURF1Q15526 300 aa15.27■□□□□ 0.04
DDX41-208ENST00000507955 MARCH8Q5T0T0 291 aa15.27■□□□□ 0.04
DDX41-208ENST00000507955 SYCP2LQ5T4T6 812 aa15.27■□□□□ 0.04
DDX41-208ENST00000507955 BCO2Q9BYV7 579 aa15.27■□□□□ 0.04
DDX41-208ENST00000507955 SETD4Q9NVD3 440 aa15.27■□□□□ 0.04
DDX41-208ENST00000507955 PRMT7Q9NVM4 692 aaPredicted RBP15.27■□□□□ 0.04
DDX41-208ENST00000507955 CEP83Q9Y592 693 aa15.27■□□□□ 0.04
DDX41-208ENST00000507955 M0QYV0 167 aa15.27■□□□□ 0.03
DDX41-208ENST00000507955 HCRTO43612 131 aa15.27■□□□□ 0.03
DDX41-208ENST00000507955 PTPN11Q06124 597 aaPredicted RBP15.27■□□□□ 0.03
DDX41-208ENST00000507955 LAMC2Q13753 1193 aa15.27■□□□□ 0.03
DDX41-208ENST00000507955 LACTB2Q53H82 288 aaPredicted RBP15.27■□□□□ 0.03
DDX41-208ENST00000507955 GLRA4Q5JXX5 417 aa15.27■□□□□ 0.03
DDX41-208ENST00000507955 LDLRAD1Q5T700 205 aa15.27■□□□□ 0.03
DDX41-208ENST00000507955 MTHFD1LQ6UB35 978 aa15.27■□□□□ 0.03
DDX41-208ENST00000507955 USP50Q70EL3 339 aaPredicted RBP15.27■□□□□ 0.03
DDX41-208ENST00000507955 FAM228AQ86W67 206 aa15.27■□□□□ 0.03
DDX41-208ENST00000507955 XYLT1Q86Y38 959 aa15.27■□□□□ 0.03
DDX41-208ENST00000507955 LRRC34Q8IZ02 419 aa15.27■□□□□ 0.03
DDX41-208ENST00000507955 LRRN4Q8WUT4 740 aa15.27■□□□□ 0.03
DDX41-208ENST00000507955 HSPH1Q92598 858 aa15.27■□□□□ 0.03
DDX41-208ENST00000507955 HPDLQ96IR7 371 aa15.27■□□□□ 0.03
DDX41-208ENST00000507955 RBM15Q96T37 977 aaKnown RBP eCLIP15.27■□□□□ 0.033e-7■□□□□ 10.7
DDX41-208ENST00000507955 ACTR5Q9H9F9 607 aaPredicted RBP15.27■□□□□ 0.03
DDX41-208ENST00000507955 GH1P01241 217 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 SMPD1P17405 629 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 CYP3A5P20815 502 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 CDH5P33151 784 aaPredicted RBP15.26■□□□□ 0.03
DDX41-208ENST00000507955 MAN1A1P33908 653 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 TFDP3Q5H9I0 405 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 TRMT10CQ7L0Y3 403 aaKnown RBP15.26■□□□□ 0.03
DDX41-208ENST00000507955 FUKQ8N0W3 1084 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 CCDC89Q8N998 374 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 ARHGEF2Q92974 986 aaKnown RBP15.26■□□□□ 0.03
DDX41-208ENST00000507955 TRIP11Q15643 1979 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 CCL15-CCL14A0A0B4J2E2 113 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 C3orf70A6NLC5 250 aaPredicted RBP15.26■□□□□ 0.03
DDX41-208ENST00000507955 SGK1O00141 431 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 TSPAN1O60635 241 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 CILPO75339 1184 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 TJP3O95049 919 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 AGTP01019 485 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 RGS7P49802 495 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 NDST1P52848 882 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 YWHAEP62258 255 aaKnown RBP15.26■□□□□ 0.03
DDX41-208ENST00000507955 SLC25A11Q02978 314 aaKnown RBP15.26■□□□□ 0.03
DDX41-208ENST00000507955 MPP2Q14168 576 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 PIGHQ14442 188 aaPredicted RBP15.26■□□□□ 0.03
DDX41-208ENST00000507955 CCL15Q16663 113 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 CDO1Q16878 200 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 DPP9Q86TI2 863 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 EXOC8Q8IYI6 725 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 ANKRD42Q8N9B4 389 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 TMEM176AQ96HP8 235 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 RBM41Q96IZ5 413 aaKnown RBP15.26■□□□□ 0.03
DDX41-208ENST00000507955 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 INTS9Q9NV88 658 aaKnown RBP15.26■□□□□ 0.03
DDX41-208ENST00000507955 PPME1Q9Y570 386 aa15.26■□□□□ 0.03
DDX41-208ENST00000507955 PECAM1P16284 738 aaPredicted RBP15.25■□□□□ 0.03
DDX41-208ENST00000507955 MMRN1Q13201 1228 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 TNFAIP8L3Q5GJ75 292 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 ZNF484Q5JVG2 852 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 TRNP1Q6NT89 227 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 HIBCHQ6NVY1 386 aaPredicted RBP15.25■□□□□ 0.03
DDX41-208ENST00000507955 CYB5D1Q6P9G0 228 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 LINC01465Q8N7H1 131 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 BRI3BPQ8WY22 251 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 ZNF518BQ9C0D4 1074 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 KATNBL1Q9H079 304 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 SAYSD1Q9NPB0 183 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 SIGLEC16A6NMB1 481 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 ASAP2O43150 1006 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 CST8O60676 142 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 IL18RAPO95256 599 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 MAP3K6O95382 1288 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 TMEM132DQ14C87 1099 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 C15orf59Q2T9L4 293 aaPredicted RBP15.25■□□□□ 0.03
DDX41-208ENST00000507955 TAX1BP1Q86VP1 789 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 PPTC7Q8NI37 304 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 ACTL9Q8TC94 416 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 ZMAT2Q96NC0 199 aaKnown RBP15.25■□□□□ 0.03
DDX41-208ENST00000507955 KCNK9Q9NPC2 374 aa15.25■□□□□ 0.03
DDX41-208ENST00000507955 GPD2P43304 727 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 OTUD4Q01804 1114 aaKnown RBP15.24■□□□□ 0.03
DDX41-208ENST00000507955 GRIK4Q16099 956 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 FAM102AQ5T9C2 384 aaPredicted RBP15.24■□□□□ 0.03
DDX41-208ENST00000507955 SYDE1Q6ZW31 735 aaPredicted RBP15.24■□□□□ 0.03
DDX41-208ENST00000507955 PIGWQ7Z7B1 504 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 ALLCQ8N6M5 410 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 GDAP1Q8TB36 358 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 KIF12Q96FN5 646 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 FAM49BQ9NUQ9 324 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 DPP3Q9NY33 737 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms