RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 SPECC1L-ADORA2AF8WAN1 911 aa22.32■■□□□ 1.16
CLDND1-216ENST00000507944 AVPR1AP37288 418 aa22.32■■□□□ 1.16
CLDND1-216ENST00000507944 AFMP43652 599 aa22.32■■□□□ 1.16
CLDND1-216ENST00000507944 CYP2J2P51589 502 aa22.32■■□□□ 1.16
CLDND1-216ENST00000507944 CCDC142Q17RM4 750 aa22.32■■□□□ 1.16
CLDND1-216ENST00000507944 FAM171BQ6P995 826 aa22.32■■□□□ 1.16
CLDND1-216ENST00000507944 TRAPPC11Q7Z392 1133 aa22.32■■□□□ 1.16
CLDND1-216ENST00000507944 MRPS31Q92665 395 aaKnown RBP22.32■■□□□ 1.16
CLDND1-216ENST00000507944 KIF26AQ9ULI4 1882 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-216ENST00000507944 OBSL1O75147 1896 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 PVALEFA0A1B0GWK0 134 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 SOBPA7XYQ1 873 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 LILRB5O75023 590 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 NOL4O94818 638 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 DLATP10515 647 aaKnown RBP22.31■■□□□ 1.16
CLDND1-216ENST00000507944 TNNI1P19237 187 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 LMO2P25791 158 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 CTHP32929 405 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 CCR3P51677 355 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 DNM1Q05193 864 aaKnown RBP22.31■■□□□ 1.16
CLDND1-216ENST00000507944 TNK2Q07912 1038 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 CUL4BQ13620 913 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 LRRC32Q14392 662 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 PPP2R5DQ14738 602 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 CFAP221Q4G0U5 840 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 TXNDC8Q6A555 127 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 TXNDC11Q6PKC3 985 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 HS2ST1Q7LGA3 356 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 MON1AQ86VX9 555 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 DCLK2Q8N568 766 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 XXYLT1Q8NBI6 393 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 KBTBD7Q8WVZ9 684 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 FUBP3Q96I24 572 aaKnown RBP eCLIP22.31■■□□□ 1.16
CLDND1-216ENST00000507944 FNBP1Q96RU3 617 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 SLC39A2Q9NP94 309 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 GKN1Q9NS71 199 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 UXTQ9UBK9 157 aaPredicted RBP22.31■■□□□ 1.16
CLDND1-216ENST00000507944 RCOR1Q9UKL0 485 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 CDH9Q9ULB4 789 aa22.31■■□□□ 1.16
CLDND1-216ENST00000507944 CEP250Q9BV73 2442 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 ATP2C2O75185 946 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 CST3P01034 146 aaPredicted RBP22.3■■□□□ 1.16
CLDND1-216ENST00000507944 CXCL12P48061 93 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 NRLP54845 237 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 CYP24A1Q07973 514 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 GAS6Q14393 721 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 PSMD6Q15008 389 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 C4orf50Q6ZRC1 276 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 SCN4BQ8IWT1 228 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 KIAA2013Q8IYS2 634 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 USP13Q92995 863 aaPredicted RBP22.3■■□□□ 1.16
CLDND1-216ENST00000507944 CCDC127Q96BQ5 260 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 TRMT2BQ96GJ1 504 aaKnown RBP22.3■■□□□ 1.16
CLDND1-216ENST00000507944 MYRFLQ96LU7 910 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 MMS19Q96T76 1030 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 SYT15Q9BQS2 421 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 RBM12Q9NTZ6 932 aaKnown RBP22.3■■□□□ 1.16
CLDND1-216ENST00000507944 TDP1Q9NUW8 608 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 MAGEC2Q9UBF1 373 aaPredicted RBP22.3■■□□□ 1.16
CLDND1-216ENST00000507944 CCL26Q9Y258 94 aa22.3■■□□□ 1.16
CLDND1-216ENST00000507944 ATG2BQ96BY7 2078 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 PDGFRBP09619 1106 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 TDGF1P13385 188 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 WARSP23381 471 aaKnown RBP22.29■■□□□ 1.16
CLDND1-216ENST00000507944 MAGEA11P43364 429 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 ID4P47928 161 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 PON2Q15165 354 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 BMT2Q1RMZ1 405 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 ITPRIPL2Q3MIP1 535 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 DGKKQ5KSL6 1271 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 CEP57L1Q8IYX8 460 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 SPEM1Q8N4L4 309 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 CGRRF1Q99675 332 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 FAM83CQ9BQN1 747 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 CGNQ9P2M7 1197 aaKnown RBP22.29■■□□□ 1.16
CLDND1-216ENST00000507944 SERTAD1Q9UHV2 236 aa22.29■■□□□ 1.16
CLDND1-216ENST00000507944 PSMC1P62191 440 aaKnown RBP22.28■■□□□ 1.16
CLDND1-216ENST00000507944 SATB1Q01826 763 aa22.28■■□□□ 1.16
CLDND1-216ENST00000507944 MAPRE1Q15691 268 aaKnown RBP22.28■■□□□ 1.16
CLDND1-216ENST00000507944 KNOP1Q1ED39 458 aaKnown RBP22.28■■□□□ 1.16
CLDND1-216ENST00000507944 WDR44Q5JSH3 913 aa22.28■■□□□ 1.16
CLDND1-216ENST00000507944 C12orf56Q8IXR9 622 aa22.28■■□□□ 1.16
CLDND1-216ENST00000507944 GRAMD1CQ8IYS0 662 aa22.28■■□□□ 1.16
CLDND1-216ENST00000507944 EPC1Q9H2F5 836 aa22.28■■□□□ 1.16
CLDND1-216ENST00000507944 KIF9Q9HAQ2 790 aa22.28■■□□□ 1.16
CLDND1-216ENST00000507944 CRTAC1Q9NQ79 661 aa22.28■■□□□ 1.16
CLDND1-216ENST00000507944 GREB1Q4ZG55 1949 aa22.27■■□□□ 1.16
CLDND1-216ENST00000507944 ANAPC1Q9H1A4 1944 aa22.27■■□□□ 1.16
CLDND1-216ENST00000507944 TADA3O75528 432 aa22.27■■□□□ 1.16
CLDND1-216ENST00000507944 SLFN14P0C7P3 912 aa22.27■■□□□ 1.16
CLDND1-216ENST00000507944 ZNF268Q14587 947 aaPredicted RBP22.27■■□□□ 1.16
CLDND1-216ENST00000507944 VSTM1Q6UX27 236 aa22.27■■□□□ 1.16
CLDND1-216ENST00000507944 ZNF516Q92618 1163 aa22.27■■□□□ 1.16
CLDND1-216ENST00000507944 MYLPFQ96A32 169 aa22.27■■□□□ 1.16
CLDND1-216ENST00000507944 NCDNQ9UBB6 729 aa22.27■■□□□ 1.16
CLDND1-216ENST00000507944 EXOC3O60645 756 aa22.26■■□□□ 1.15
CLDND1-216ENST00000507944 FAM163BP0C2L3 166 aa22.26■■□□□ 1.15
CLDND1-216ENST00000507944 BDNFP23560 247 aa22.26■■□□□ 1.15
CLDND1-216ENST00000507944 GNL1P36915 607 aaPredicted RBP22.26■■□□□ 1.15
CLDND1-216ENST00000507944 RUNX3Q13761 415 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms