RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ZDHHC7Q9NXF8 308 aa21.32■■□□□ 1
USP53-203ENST00000507597 EHD2Q9NZN4 543 aa21.32■■□□□ 1
USP53-203ENST00000507597 LUC7L2Q9Y383 392 aaKnown RBP21.32■■□□□ 1
USP53-203ENST00000507597 F8VZ95 297 aa21.31■■□□□ 1
USP53-203ENST00000507597 ATP2C2O75185 946 aa21.31■■□□□ 1
USP53-203ENST00000507597 HNRNPA1P09651 372 aaKnown RBP eCLIP21.31■■□□□ 1
USP53-203ENST00000507597 FERP16591 822 aa21.31■■□□□ 1
USP53-203ENST00000507597 GNA15P30679 374 aa21.31■■□□□ 1
USP53-203ENST00000507597 HOXA9P31269 272 aa21.31■■□□□ 1
USP53-203ENST00000507597 PDE6CP51160 858 aa21.31■■□□□ 1
USP53-203ENST00000507597 ZNF75DP51815 510 aa21.31■■□□□ 1
USP53-203ENST00000507597 APBA1Q02410 837 aa21.31■■□□□ 1
USP53-203ENST00000507597 DUSP4Q13115 394 aa21.31■■□□□ 1
USP53-203ENST00000507597 ADAM15Q13444 863 aa21.31■■□□□ 1
USP53-203ENST00000507597 VEPH1Q14D04 833 aa21.31■■□□□ 1
USP53-203ENST00000507597 SKIV2LQ15477 1246 aaKnown RBP21.31■■□□□ 1
USP53-203ENST00000507597 LLGL2Q6P1M3 1020 aa21.31■■□□□ 1
USP53-203ENST00000507597 DRC7Q8IY82 874 aa21.31■■□□□ 1
USP53-203ENST00000507597 PABPC5Q96DU9 382 aaKnown RBP21.31■■□□□ 1
USP53-203ENST00000507597 PKMYT1Q99640 499 aa21.31■■□□□ 1
USP53-203ENST00000507597 PDCL3Q9H2J4 239 aa21.31■■□□□ 1
USP53-203ENST00000507597 ASB3Q9Y575 518 aa21.31■■□□□ 1
USP53-203ENST00000507597 CEP83Q9Y592 693 aa21.31■■□□□ 1
USP53-203ENST00000507597 MYO9BQ13459 2157 aa21.31■■□□□ 1
USP53-203ENST00000507597 CHD9Q3L8U1 2897 aa21.3■■□□□ 1
USP53-203ENST00000507597 LAMA3Q16787 3333 aa21.3■■□□□ 1
USP53-203ENST00000507597 XYLBO75191 536 aa21.3■■□□□ 1
USP53-203ENST00000507597 C8AP07357 584 aa21.3■■□□□ 1
USP53-203ENST00000507597 FAM200BP0CF97 657 aa21.3■■□□□ 1
USP53-203ENST00000507597 KRT9P35527 623 aa21.3■■□□□ 1
USP53-203ENST00000507597 GRIK1P39086 918 aa21.3■■□□□ 1
USP53-203ENST00000507597 ZNF132P52740 706 aa21.3■■□□□ 1
USP53-203ENST00000507597 EPHB3P54753 998 aa21.3■■□□□ 1
USP53-203ENST00000507597 ZBED6P86452 979 aa21.3■■□□□ 1
USP53-203ENST00000507597 CNGA2Q16280 664 aa21.3■■□□□ 1
USP53-203ENST00000507597 TAF12Q16514 161 aa21.3■■□□□ 1
USP53-203ENST00000507597 MEA1Q16626 185 aa21.3■■□□□ 1
USP53-203ENST00000507597 EP400NLQ6ZTU2 488 aa21.3■■□□□ 1
USP53-203ENST00000507597 ITIH5Q86UX2 942 aa21.3■■□□□ 1
USP53-203ENST00000507597 ZNF677Q86XU0 584 aa21.3■■□□□ 1
USP53-203ENST00000507597 ATAD1Q8NBU5 361 aa21.3■■□□□ 1
USP53-203ENST00000507597 TWNKQ96RR1 684 aa21.3■■□□□ 1
USP53-203ENST00000507597 SEPT5Q99719 369 aaPredicted RBP21.3■■□□□ 1
USP53-203ENST00000507597 SFXN1Q9H9B4 322 aa21.3■■□□□ 1
USP53-203ENST00000507597 GRPEL1Q9HAV7 217 aa21.3■■□□□ 1
USP53-203ENST00000507597 CLDND1Q9NY35 253 aa21.3■■□□□ 1
USP53-203ENST00000507597 HMGXB4Q9UGU5 601 aa21.3■■□□□ 1
USP53-203ENST00000507597 CAPN11Q9UMQ6 739 aa21.3■■□□□ 1
USP53-203ENST00000507597 CYP26A1O43174 497 aa21.29■■□□□ 1
USP53-203ENST00000507597 THAP12O43422 761 aa21.29■■□□□ 1
USP53-203ENST00000507597 ZMYND10O75800 440 aa21.29■■□□□ 1
USP53-203ENST00000507597 HAPLN1P10915 354 aaPredicted RBP21.29■■□□□ 1
USP53-203ENST00000507597 EPCAMP16422 314 aa21.29■■□□□ 1
USP53-203ENST00000507597 MRE11P49959 708 aa21.29■■□□□ 1
USP53-203ENST00000507597 JAM2P57087 298 aa21.29■■□□□ 1
USP53-203ENST00000507597 ORC1Q13415 861 aa21.29■■□□□ 1
USP53-203ENST00000507597 SFMBT2Q5VUG0 894 aa21.29■■□□□ 1
USP53-203ENST00000507597 C12orf29Q8N999 325 aa21.29■■□□□ 1
USP53-203ENST00000507597 SLC7A14Q8TBB6 771 aa21.29■■□□□ 1
USP53-203ENST00000507597 SLC2A14Q8TDB8 520 aa21.29■■□□□ 1
USP53-203ENST00000507597 B3GNT5Q9BYG0 378 aa21.29■■□□□ 1
USP53-203ENST00000507597 FAM49BQ9NUQ9 324 aa21.29■■□□□ 1
USP53-203ENST00000507597 ZNHIT6Q9NWK9 470 aaKnown RBP21.29■■□□□ 1
USP53-203ENST00000507597 NME7Q9Y5B8 376 aa21.29■■□□□ 1
USP53-203ENST00000507597 TSC2P49815 1807 aa21.29■■□□□ 1
USP53-203ENST00000507597 HCRTO43612 131 aa21.28■■□□□ 1
USP53-203ENST00000507597 AP1G2O75843 785 aa21.28■■□□□ 1
USP53-203ENST00000507597 BDNFP23560 247 aa21.28■■□□□ 1
USP53-203ENST00000507597 BCAT1P54687 386 aa21.28■■□□□ 1
USP53-203ENST00000507597 SNX16P57768 344 aa21.28■■□□□ 1
USP53-203ENST00000507597 PPP1R26Q5T8A7 1209 aaPredicted RBP21.28■■□□□ 1
USP53-203ENST00000507597 CES5AQ6NT32 575 aa21.28■■□□□ 1
USP53-203ENST00000507597 LCLAT1Q6UWP7 414 aa21.28■■□□□ 1
USP53-203ENST00000507597 TMC6Q7Z403 805 aa21.28■■□□□ 1
USP53-203ENST00000507597 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.28■■□□□ 1
USP53-203ENST00000507597 FAM35AQ86V20 835 aa21.28■■□□□ 1
USP53-203ENST00000507597 CNGA4Q8IV77 575 aa21.28■■□□□ 1
USP53-203ENST00000507597 SCN4BQ8IWT1 228 aa21.28■■□□□ 1
USP53-203ENST00000507597 ANKRD52Q8NB46 1076 aa21.28■■□□□ 1
USP53-203ENST00000507597 CMASQ8NFW8 434 aaPredicted RBP21.28■■□□□ 1
USP53-203ENST00000507597 ZNF606Q8WXB4 792 aa21.28■■□□□ 1
USP53-203ENST00000507597 SYN2Q92777 582 aaPredicted RBP21.28■■□□□ 1
USP53-203ENST00000507597 ZNF512Q96ME7 567 aaPredicted RBP21.28■■□□□ 1
USP53-203ENST00000507597 DMAP1Q9NPF5 467 aaPredicted RBP21.28■■□□□ 1
USP53-203ENST00000507597 TMLHEQ9NVH6 421 aa21.28■■□□□ 1
USP53-203ENST00000507597 INSL5Q9Y5Q6 135 aa21.28■■□□□ 1
USP53-203ENST00000507597 BZW2Q9Y6E2 419 aaKnown RBP21.28■■□□□ 1
USP53-203ENST00000507597 RNF225M0QZC1 329 aaPredicted RBP21.27■■□□□ 1
USP53-203ENST00000507597 EPHB6O15197 1021 aa21.27■■□□□ 1
USP53-203ENST00000507597 GFPT2O94808 682 aa21.27■■□□□ 1
USP53-203ENST00000507597 ADCY5O95622 1261 aa21.27■■□□□ 1
USP53-203ENST00000507597 POU2F2P09086 479 aa21.27■■□□□ 1
USP53-203ENST00000507597 SPATA31D3P0C874 917 aa21.27■■□□□ 1
USP53-203ENST00000507597 SETSIPP0DME0 302 aa21.27■■□□□ 1
USP53-203ENST00000507597 CSH1P0DML2 217 aa21.27■■□□□ 1
USP53-203ENST00000507597 CSH2P0DML3 217 aa21.27■■□□□ 1
USP53-203ENST00000507597 CCDC130P13994 396 aa21.27■■□□□ 1
USP53-203ENST00000507597 CYP2F1P24903 491 aa21.27■■□□□ 1
USP53-203ENST00000507597 ADORA2BP29275 332 aa21.27■■□□□ 1
USP53-203ENST00000507597 CDC25BP30305 580 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms