RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 TTC8Q8TAM2 541 aa4.43□□□□□ -1.7
SSBP2-206ENST00000506960 PPP1R35Q8TAP8 253 aa4.43□□□□□ -1.7
SSBP2-206ENST00000506960 SLC35G2Q8TBE7 412 aa4.43□□□□□ -1.7
SSBP2-206ENST00000506960 TNPO1Q92973 898 aaKnown RBP4.43□□□□□ -1.7
SSBP2-206ENST00000506960 C8orf48Q96LL4 319 aa4.43□□□□□ -1.7
SSBP2-206ENST00000506960 CGRRF1Q99675 332 aa4.43□□□□□ -1.7
SSBP2-206ENST00000506960 ACO2Q99798 780 aaKnown RBP4.43□□□□□ -1.7
SSBP2-206ENST00000506960 ALG8Q9BVK2 526 aa4.43□□□□□ -1.7
SSBP2-206ENST00000506960 MRPL46Q9H2W6 279 aaKnown RBP4.43□□□□□ -1.7
SSBP2-206ENST00000506960 FAM204AQ9H8W3 233 aa4.43□□□□□ -1.7
SSBP2-206ENST00000506960 SERHLQ9NQF3 203 aa4.43□□□□□ -1.7
SSBP2-206ENST00000506960 PRDM11Q9NQV5 511 aa4.43□□□□□ -1.7
SSBP2-206ENST00000506960 C1orf112Q9NSG2 853 aa4.43□□□□□ -1.7
SSBP2-206ENST00000506960 ABCF2Q9UG63 623 aa4.43□□□□□ -1.7
SSBP2-206ENST00000506960 SERGEFQ9UGK8 458 aa4.43□□□□□ -1.7
SSBP2-206ENST00000506960 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.43□□□□□ -1.7
SSBP2-206ENST00000506960 SETD1BQ9UPS6 1966 aaKnown RBP4.42□□□□□ -1.7
SSBP2-206ENST00000506960 H3BML4 177 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 H3BUI4 141 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 AHSGP02765 367 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 ALDH2P05091 517 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 PRKCGP05129 697 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 CELA2AP08217 269 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 EBLN1P0CF75 366 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 JUPP14923 745 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 ZFXP17010 805 aaPredicted RBP4.42□□□□□ -1.7
SSBP2-206ENST00000506960 ITGALP20701 1170 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 HTR1BP28222 390 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 CD6P30203 668 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 TBCCQ15814 346 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 CCDC181Q5TID7 509 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 B3GNT9Q6UX72 402 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 NOL8Q76FK4 1167 aaKnown RBP4.42□□□□□ -1.7
SSBP2-206ENST00000506960 PPP1R3BQ86XI6 285 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 CCAR1Q8IX12 1150 aaKnown RBP4.42□□□□□ -1.7
SSBP2-206ENST00000506960 KLHDC4Q8TBB5 520 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 FAM136AQ96C01 138 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 RUNDC1Q96C34 613 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 CDK5RAP3Q96JB5 506 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 WDCPQ9H6R7 721 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 ARMT1Q9H993 441 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 EHD3Q9NZN3 535 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 ZDHHC8Q9ULC8 765 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 RAD54BQ9Y620 910 aa4.42□□□□□ -1.7
SSBP2-206ENST00000506960 FRMPD2Q68DX3 1309 aaPredicted RBP4.42□□□□□ -1.7
SSBP2-206ENST00000506960 FAM227AF5H4B4 570 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 M0QYG6 137 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 SOAT2O75908 522 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 UBXN7O94888 489 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 TYRP14679 529 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 GCLCP48506 637 aaPredicted RBP4.41□□□□□ -1.7
SSBP2-206ENST00000506960 CCT8P50990 548 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 ZNF134P52741 427 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 EIF2B5Q13144 721 aaKnown RBP4.41□□□□□ -1.7
SSBP2-206ENST00000506960 FAM153CQ494X1 144 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 USP37Q86T82 979 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 SLC35A4Q96G79 324 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 FAM167AQ96KS9 214 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 ZNF778Q96MU6 729 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 CNNM1Q9NRU3 951 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.41□□□□□ -1.7
SSBP2-206ENST00000506960 SERTAD4Q9NUC0 356 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 OBP2AQ9NY56 170 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 STAP2Q9UGK3 403 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 DDX20Q9UHI6 824 aaKnown RBP4.41□□□□□ -1.7
SSBP2-206ENST00000506960 PADI4Q9UM07 663 aa4.41□□□□□ -1.7
SSBP2-206ENST00000506960 LINC01548A6NM66 108 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 KIF3BO15066 747 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 PPM1DO15297 605 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 PRC1O43663 620 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 HNRNPCP07910 306 aaKnown RBP eCLIP4.4□□□□□ -1.71
SSBP2-206ENST00000506960 GRM3Q14832 879 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 TMEM119Q4V9L6 283 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 TMEM108Q6UXF1 575 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 ZNF782Q6ZMW2 699 aaPredicted RBP4.4□□□□□ -1.71
SSBP2-206ENST00000506960 CCDC149Q6ZUS6 474 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 OVCH2Q7RTZ1 564 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 ZNF551Q7Z340 670 aaPredicted RBP4.4□□□□□ -1.71
SSBP2-206ENST00000506960 FAM46DQ8NEK8 389 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 BRIX1Q8TDN6 353 aaKnown RBP4.4□□□□□ -1.71
SSBP2-206ENST00000506960 B3GNT5Q9BYG0 378 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 SIK2Q9H0K1 926 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 ZNF70Q9UC06 446 aaPredicted RBP4.4□□□□□ -1.71
SSBP2-206ENST00000506960 CPA4Q9UI42 421 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 PCDHA1Q9Y5I3 950 aa4.4□□□□□ -1.71
SSBP2-206ENST00000506960 CECR2Q9BXF3 1484 aa4.39□□□□□ -1.71
SSBP2-206ENST00000506960 WDR91A4D1P6 747 aa4.39□□□□□ -1.71
SSBP2-206ENST00000506960 DCLK1O15075 740 aa4.39□□□□□ -1.71
SSBP2-206ENST00000506960 GNAI2P04899 355 aa4.39□□□□□ -1.71
SSBP2-206ENST00000506960 PIM1P11309 404 aaPredicted RBP4.39□□□□□ -1.71
SSBP2-206ENST00000506960 RAB1AP62820 205 aa4.39□□□□□ -1.71
SSBP2-206ENST00000506960 EXOSC9Q06265 439 aaKnown RBP4.39□□□□□ -1.71
SSBP2-206ENST00000506960 BMPR2Q13873 1038 aa4.39□□□□□ -1.71
SSBP2-206ENST00000506960 GBX1Q14549 363 aa4.39□□□□□ -1.71
SSBP2-206ENST00000506960 PLS1Q14651 629 aa4.39□□□□□ -1.71
SSBP2-206ENST00000506960 LLGL1Q15334 1064 aa4.39□□□□□ -1.71
SSBP2-206ENST00000506960 PLAC9Q5JTB6 97 aa4.39□□□□□ -1.71
SSBP2-206ENST00000506960 FAM160B1Q5W0V3 765 aa4.39□□□□□ -1.71
SSBP2-206ENST00000506960 MAVSQ7Z434 540 aa4.39□□□□□ -1.71
SSBP2-206ENST00000506960 DGKHQ86XP1 1220 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms