RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PTTG1IPP53801 180 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 PIGFQ07326 219 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 CNGB1Q14028 1251 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 IQCB1Q15051 598 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 TAF5Q15542 800 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 MAPKAPK3Q16644 382 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 PLA1AQ53H76 456 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 PLAG1Q6DJT9 500 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 JMJD6Q6NYC1 403 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 DRICH1Q6PGQ1 229 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 ARHGEF18Q6ZSZ5 1173 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 MED25Q71SY5 747 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 PPP1R32Q7Z5V6 425 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 GAS2L3Q86XJ1 694 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 GATAD2AQ86YP4 633 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 PDPRQ8NCN5 879 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 IL17REQ8NFR9 667 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 STYXQ8WUJ0 223 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 NUP133Q8WUM0 1156 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 RUBCNQ92622 972 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 USP13Q92995 863 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 EID2BQ96D98 161 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 NEIL1Q96FI4 390 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 UBXN10Q96LJ8 280 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 LMF1Q96S06 567 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 PRPF18Q99633 342 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 DPYSL5Q9BPU6 564 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 VKORC1Q9BQB6 163 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 REXO4Q9GZR2 422 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 SEC61A2Q9H9S3 476 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 IGSF9Q9P2J2 1179 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 HECAQ9UBI9 543 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 HESX1Q9UBX0 185 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 ZMYND8Q9ULU4 1186 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 CAPN11Q9UMQ6 739 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 MAP3K4Q9Y6R4 1608 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 HECW2Q9P2P5 1572 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 A0A087WZ62 844 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 A0A1B0GVC2 190 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 AQP7P3A6NL99 342 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 DRGXA6NNA5 263 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 H7C4K7 107 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 EIF3FO00303 357 aaPredicted RBP3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 NCAM2O15394 837 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 EPB41L2O43491 1005 aaKnown RBP3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 B4GALT3O60512 393 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 COQ9O75208 318 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 VPS4BO75351 444 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 IPO13O94829 963 aaKnown RBP3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 ITGB1P05556 798 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 ITGA2BP08514 1039 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 INHBBP09529 407 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 SRGNP10124 158 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 SLURP1P55000 103 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 PPP2CBP62714 309 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 PPP2CAP67775 309 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 DDX10Q13206 875 aaKnown RBP3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 GRM7Q14831 915 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 NPY5RQ15761 445 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 TIGD6Q17RP2 521 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 MGAT5BQ3V5L5 792 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 ARHGAP15Q53QZ3 475 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 METTL24Q5JXM2 366 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 ANKRD45Q5TZF3 282 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 TANGO2Q6ICL3 276 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 KLHL17Q6TDP4 642 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 CRTC1Q6UUV9 634 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 CLEC4GQ6UXB4 293 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 KIAA0408Q6ZU52 694 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 USP49Q70CQ1 688 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 LGI4Q8N135 537 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 CFAP52Q8N1V2 620 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 TP53I13Q8NBR0 393 aaPredicted RBP3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 RNF169Q8NCN4 708 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 NAXEQ8NCW5 288 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 PPHLN1Q8NEY8 458 aaKnown RBP3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 ST8SIA2Q92186 375 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 C20orf173Q96LM9 149 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 PPM1MQ96MI6 270 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 SMOQ99835 787 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 EIF2AK1Q9BQI3 630 aaKnown RBP3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 MESP1Q9BRJ9 268 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 KATNAL1Q9BW62 490 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 PCDHAC1Q9H158 963 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 FAM83DQ9H4H8 585 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 ZHX3Q9H4I2 956 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 ZBTB26Q9HCK0 441 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 PDP2Q9P2J9 529 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 DKK4Q9UBT3 224 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 HERC5Q9UII4 1024 aaKnown RBP3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 SHOC2Q9UQ13 582 aa3.75□□□□□ -1.81
TRAPPC11-205ENST00000506426 TEX14Q8IWB6 1497 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 RRN3P2A6NIE6 340 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 NPIPB6E9PJ23 425 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 IPO5O00410 1097 aaKnown RBP3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 POLRMTO00411 1230 aaKnown RBP3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 ABCA8O94911 1581 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 TNFRSF6BO95407 300 aa3.74□□□□□ -1.81
TRAPPC11-205ENST00000506426 ATXN1LP0C7T5 689 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms