RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ODC1P11926 461 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 FKBP1BP68106 108 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 SP2Q02086 613 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 DEFB115Q30KQ5 88 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 OR6P1Q8NGX9 317 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 EXT2Q93063 718 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 ADAM2Q99965 735 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 TMEM121Q9BTD3 319 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 PPME1Q9Y570 386 aa14.76□□□□□ -0.05
TCOF1-207ENST00000504761 STRCQ7RTU9 1775 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 A0A0A6YYK5 440 aaPredicted RBP14.75□□□□□ -0.05
TCOF1-207ENST00000504761 PRRG1O14668 218 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 FSTL1Q12841 308 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 CREG2Q8IUH2 290 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 AFAP1L2Q8N4X5 818 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 SHC3Q92529 594 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 XPO7Q9UIA9 1087 aaKnown RBP14.75□□□□□ -0.05
TCOF1-207ENST00000504761 MROH7Q68CQ1 1323 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 ATICP31939 592 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 ALDH7A1P49419 539 aaKnown RBP14.75□□□□□ -0.05
TCOF1-207ENST00000504761 COG7P83436 770 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 SP3Q02447 781 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 SHCBP1Q8NEM2 672 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 SLC2A14Q8TDB8 520 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 EDEM1Q92611 657 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 TTC25Q96NG3 672 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 KLF6Q99612 283 aaPredicted RBP14.75□□□□□ -0.05
TCOF1-207ENST00000504761 RGS17Q9UGC6 210 aaPredicted RBP14.75□□□□□ -0.05
TCOF1-207ENST00000504761 TPX2Q9ULW0 747 aaKnown RBP14.75□□□□□ -0.05
TCOF1-207ENST00000504761 KPNA7A9QM74 516 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 F8VP50 259 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 PPP1R12AO14974 1030 aaPredicted RBP14.75□□□□□ -0.05
TCOF1-207ENST00000504761 BCAT1P54687 386 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 RPS6KA2Q15349 733 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 FAM71AQ8IYT1 594 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 BRI3BPQ8WY22 251 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 LPPQ93052 612 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 PGLYRP2Q96PD5 576 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 ZNF518BQ9C0D4 1074 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 PFDN4Q9NQP4 134 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 KIAA1257Q9ULG3 409 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 USP18Q9UMW8 372 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 CDY2AQ9Y6F7 541 aa14.75□□□□□ -0.05
TCOF1-207ENST00000504761 KRT38O76015 456 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 NOL4O94818 638 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
TCOF1-207ENST00000504761 MLH1P40692 756 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 OTUD4Q01804 1114 aaKnown RBP14.74□□□□□ -0.05
TCOF1-207ENST00000504761 ADAM32Q8TC27 787 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 FUT8Q9BYC5 575 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 A0A0B4J269 797 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 ZNF263O14978 683 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 DHX15O43143 795 aaKnown RBP14.74□□□□□ -0.05
TCOF1-207ENST00000504761 PJA2O43164 708 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 H2AFXP16104 143 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-207ENST00000504761 SCNN1GP51170 649 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 DCP1BQ8IZD4 617 aaKnown RBP14.74□□□□□ -0.05
TCOF1-207ENST00000504761 KREMEN1Q96MU8 473 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 NUDCD1Q96RS6 583 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 PITPNM3Q9BZ71 974 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 RNF208Q9H0X6 261 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 ATP11BQ9Y2G3 1177 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 MICAL2O94851 1124 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 SERPINB6P35237 376 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
TCOF1-207ENST00000504761 C4orf33Q8N1A6 199 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 ACTL9Q8TC94 416 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 ACTRT1Q8TDG2 376 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 DHX33Q9H6R0 707 aaKnown RBP14.74□□□□□ -0.05
TCOF1-207ENST00000504761 DONSONQ9NYP3 566 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 NHSL1Q5SYE7 1610 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 TAF1P21675 1872 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 CIB2O75838 187 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 CCDC130P13994 396 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 DENND1BQ6P3S1 775 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 HMX1Q9NP08 348 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-207ENST00000504761 L1RE1Q9UN81 338 aa14.74□□□□□ -0.05
TCOF1-207ENST00000504761 ARHGAP42A6NI28 874 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 E5RJQ4 531 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 KPNA6O60684 536 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 CST3P01034 146 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-207ENST00000504761 IRF1P10914 325 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 MARCKSL1P49006 195 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 TKTL1P51854 596 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 RTP1P59025 263 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 FMO1Q01740 532 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 TFDP3Q5H9I0 405 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 C10orf120Q5SQS8 335 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 SYT15Q9BQS2 421 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 CNPY3Q9BT09 278 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 GOLGA8CPA6NN73 597 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 DCDC2CA8MYV0 355 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 PFDN6O15212 129 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 PSTPIP1O43586 416 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 LSM8O95777 96 aaKnown RBP14.73□□□□□ -0.05
TCOF1-207ENST00000504761 TMPRSS15P98073 1019 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 SPARCL1Q14515 664 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 ATP13A4Q4VNC1 1196 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 UBE2Q2Q8WVN8 375 aa14.73□□□□□ -0.05
TCOF1-207ENST00000504761 RAPGEF5Q92565 580 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms