RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 CASTOR2A6NHX0 329 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 NT5C1B-RDH14C9J2C7 533 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 PODXLO00592 558 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 PIRO00625 290 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 PHACTR2O75167 634 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 B3GAT3O94766 335 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 TNNC2P02585 160 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 FAM163BP0C2L3 166 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 TMEM191BP0C7N4 346 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 ACO1P21399 889 aaKnown RBP10.84□□□□□ -0.67
USP17L28-201ENST00000504543 FGFR3P22607 806 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 IGFBP4P22692 258 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 USP8P40818 1118 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 PNPLA4P41247 253 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 CLCNKBP51801 687 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 ZNF132P52740 706 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 ERVFC1P60507 584 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 CTC1Q2NKJ3 1217 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 GLRA4Q5JXX5 417 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 KIAA0319Q5VV43 1072 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 JADE1Q6IE81 842 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 C11orf63Q6NUN7 778 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 FBXO38Q6PIJ6 1188 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 TRIM72Q6ZMU5 477 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 RTL10Q7L3V2 364 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 TMC7Q7Z402 723 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 CREG2Q8IUH2 290 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 LRRC52Q8N7C0 313 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 MAFAQ8NHW3 353 aaPredicted RBP10.84□□□□□ -0.67
USP17L28-201ENST00000504543 SPATA18Q8TC71 538 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 PIK3R5Q8WYR1 880 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 SUSD3Q96L08 255 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 MTMR12Q9C0I1 747 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 NIF3L1Q9GZT8 377 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 FAM124BQ9H5Z6 455 aaPredicted RBP10.84□□□□□ -0.67
USP17L28-201ENST00000504543 APOBEC3GQ9HC16 384 aaKnown RBP10.84□□□□□ -0.67
USP17L28-201ENST00000504543 SEPT11Q9NVA2 429 aaKnown RBP10.84□□□□□ -0.67
USP17L28-201ENST00000504543 GTF3C4Q9UKN8 822 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 COG5Q9UP83 839 aa10.84□□□□□ -0.67
USP17L28-201ENST00000504543 C2orf71A6NGG8 1288 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 M0QZQ0 153 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 KIF4AO95239 1232 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 STAU1O95793 577 aaKnown RBP10.83□□□□□ -0.68
USP17L28-201ENST00000504543 URODP06132 367 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 NFICP08651 508 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 KRT5P13647 590 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 PBX3P40426 434 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 NOP2P46087 812 aaKnown RBP10.83□□□□□ -0.68
USP17L28-201ENST00000504543 GLUD2P49448 558 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 YWHAEP62258 255 aaKnown RBP10.83□□□□□ -0.68
USP17L28-201ENST00000504543 KCNC3Q14003 757 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 DUSP6Q16828 381 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 CLEC16AQ2KHT3 1053 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 SGSM1Q2NKQ1 1148 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 EFCAB13Q8IY85 973 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 EFHBQ8N7U6 833 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 HDAC7Q8WUI4 952 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 C18orf25Q96B23 403 aaPredicted RBP10.83□□□□□ -0.68
USP17L28-201ENST00000504543 TRIM11Q96F44 468 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 MMS19Q96T76 1030 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 ARID3AQ99856 593 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 TCF25Q9BQ70 676 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 PAAF1Q9BRP4 392 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 GPR62Q9BZJ7 368 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 VRTNQ9H8Y1 702 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 ABCB6Q9NP58 842 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 MRPL17Q9NRX2 175 aaKnown RBP10.83□□□□□ -0.68
USP17L28-201ENST00000504543 DPP3Q9NY33 737 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 TAS2R14Q9NYV8 317 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 ITGA11Q9UKX5 1188 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 RAB21Q9UL25 225 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 NUB1Q9Y5A7 615 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 BACE2Q9Y5Z0 518 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 SCN1AP35498 2009 aa10.83□□□□□ -0.68
USP17L28-201ENST00000504543 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.82□□□□□ -0.68
USP17L28-201ENST00000504543 TARSL2A2RTX5 802 aaKnown RBP10.82□□□□□ -0.68
USP17L28-201ENST00000504543 SRGAP2O75044 1071 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 PAPLNO95428 1278 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 CXCL14O95715 111 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 FTCDO95954 541 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 FTLP02792 175 aaPredicted RBP10.82□□□□□ -0.68
USP17L28-201ENST00000504543 CYP1A2P05177 515 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 MMEP08473 750 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 TYMPP19971 482 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 GPC5P78333 572 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 RBM10P98175 930 aaKnown RBP10.82□□□□□ -0.68
USP17L28-201ENST00000504543 CENPCQ03188 943 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 MRPL58Q14197 206 aaKnown RBP10.82□□□□□ -0.68
USP17L28-201ENST00000504543 CFAP221Q4G0U5 840 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 C9orf57Q5W0N0 161 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 SPOPLQ6IQ16 392 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 APPL2Q8NEU8 664 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 CXorf38Q8TB03 319 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 SLC35G2Q8TBE7 412 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 COG1Q8WTW3 980 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 PABPC5Q96DU9 382 aaKnown RBP10.82□□□□□ -0.68
USP17L28-201ENST00000504543 PBKQ96KB5 322 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 FAM84AQ96KN4 292 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 ZNF560Q96MR9 790 aa10.82□□□□□ -0.68
USP17L28-201ENST00000504543 PCDHB18PQ96TA0 734 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms