RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	HAUS1	Q96CS2	278 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	MCRS1	Q96EZ8	462 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	CPB2	Q96IY4	423 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	C16orf70	Q9BSU1	422 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	PCDH9	Q9HC56	1237 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	VTA1	Q9NP79	307 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	METTL5	Q9NRN9	209 aa	Known RBP	13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	NAALADL1	Q9UQQ1	740 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	VTN	P04004	478 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	PECAM1	P16284	738 aa	Predicted RBP	13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	GPS1	Q13098	491 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	SNAPC2	Q13487	334 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	MORF4L2	Q15014	288 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	SPRED3	Q2MJR0	410 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	SMTNL2	Q2TAL5	461 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	CCDC121	Q6ZUS5	278 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	BBS12	Q6ZW61	710 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	EMC1	Q8N766	993 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	AFG1L	Q8WV93	481 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	CCT6B	Q92526	530 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	PPP1R16B	Q96T49	567 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	TMEM121	Q9BTD3	319 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	KATNBL1	Q9H079	304 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	AKT3	Q9Y243	479 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	CAPN7	Q9Y6W3	813 aa		13.72	□□□□□ -0.21
MATR3-233	ENST00000504203	FOXO6	A8MYZ6	492 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	HMGCR	P04035	888 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	KDELR1	P24390	212 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	ADORA2A	P29274	412 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	IFNAR2	P48551	515 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	INCA1	Q0VD86	236 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	MPP2	Q14168	576 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	KYAT1	Q16773	422 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	HADH	Q16836	314 aa	Known RBP	13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	LACTB2	Q53H82	288 aa	Predicted RBP	13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	KCNT1	Q5JUK3	1230 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	CCDC197	Q8NCU1	140 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	GPRC5A	Q8NFJ5	357 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	ACTL9	Q8TC94	416 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	CCDC77	Q9BR77	488 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	ZWILCH	Q9H900	591 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	SAYSD1	Q9NPB0	183 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	PNMA3	Q9UL41	463 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	SHOC2	Q9UQ13	582 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	ACTL7B	Q9Y614	415 aa		13.71	□□□□□ -0.21
MATR3-233	ENST00000504203	STAU1	O95793	577 aa	Known RBP	13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	ZNF286B	P0CG31	522 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	VDR	P11473	427 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	BRAF	P15056	766 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	GCA	P28676	217 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	PSMC4	P43686	418 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	ITIH4	Q14624	930 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	ACAP1	Q15027	740 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	C9orf131	Q5VYM1	1079 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	MTHFD1L	Q6UB35	978 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	CNPY4	Q8N129	248 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	RIBC1	Q8N443	379 aa	Predicted RBP	13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	CMAS	Q8NFW8	434 aa	Predicted RBP	13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	MAML1	Q92585	1016 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	P3H4	Q92791	437 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	HPDL	Q96IR7	371 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	CFAP57	Q96MR6	1250 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	TTC25	Q96NG3	672 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	TMEM51	Q9NW97	253 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	SAE1	Q9UBE0	346 aa	Predicted RBP	13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	C2CD2	Q9Y426	696 aa		13.71	□□□□□ -0.22
MATR3-233	ENST00000504203	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.71	□□□□□ -0.22
MATR3-233	ENST00000504203		A0A1B0GUA9	196 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203		M0QYV0	167 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	SGK1	O00141	431 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	DNM1L	O00429	736 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	ALOX15B	O15296	676 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	TSPAN1	O60635	241 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	CST8	O60676	142 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	P4HA1	P13674	534 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	EPHX2	P34913	555 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	OTUD4	Q01804	1114 aa	Known RBP	13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	TMEM132D	Q14C87	1099 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	FASTKD3	Q14CZ7	662 aa	Known RBP	13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	LRRC14	Q15048	493 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	ANKRD20A8P	Q5CZ79	823 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	MAP1S	Q66K74	1059 aa	Predicted RBP	13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	CYP4F22	Q6NT55	531 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	CCDC13	Q8IYE1	715 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	TTC13	Q8NBP0	860 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	PRCC	Q92733	491 aa	Predicted RBP	13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	SYNC	Q9H7C4	482 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	ITGA11	Q9UKX5	1188 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	AGAP1	Q9UPQ3	857 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	PLXNB2	O15031	1838 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	NDC80	O14777	642 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	VIM	P08670	466 aa	Known RBP	13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	CD48	P09326	243 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	CYP3A5	P20815	502 aa		13.7	□□□□□ -0.22
MATR3-233	ENST00000504203	MIP	P30301	263 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms