RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 CLSTN1O94985 981 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 CHEK2O96017 543 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 CRYABP02511 175 aaKnown RBP2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 CHRM5P08912 532 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 PRF1P14222 555 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 JUPP14923 745 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 ITGALP20701 1170 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 TLE1Q04724 770 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 PGM2L1Q6PCE3 622 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 SLC30A10Q6XR72 485 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 KRT26Q7Z3Y9 468 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 GALNT4Q8N4A0 578 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 FBXO41Q8TF61 875 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 ZC3H10Q96K80 434 aaKnown RBP2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 MRGPRX4Q96LA9 322 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 CNPPD1Q9BV87 410 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 AMBRA1Q9C0C7 1298 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 SIK2Q9H0K1 926 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 FOXP1Q9H334 677 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 MKS1Q9NXB0 559 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 SIDT1Q9NXL6 827 aaKnown RBP2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 TUBD1Q9UJT1 453 aa2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 TMA7Q9Y2S6 64 aaKnown RBP2.7□□□□□ -1.98
HMGB3P17-201ENST00000504195 TLDC2A0PJX2 215 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 KLHL33A6NCF5 533 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 C4orf47A7E2U8 309 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 E9PLN8 166 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 H0YIZ8 118 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 H3BNX3 289 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 HTRA2O43464 458 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 VIL1P09327 827 aaKnown RBP2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 SMARCA1P28370 1054 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 PCSK6P29122 969 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 CD6P30203 668 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 CYP2C19P33261 490 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 CDKN2AP42771 156 aaKnown RBP2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 SRSF1Q07955 248 aaKnown RBP eCLIP2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 IL10RAQ13651 578 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 TRIM71Q2Q1W2 868 aaKnown RBP2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 ZNF585BQ52M93 769 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 CCDC93Q567U6 631 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 PCID2Q5JVF3 399 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 RBM20Q5T481 1227 aaKnown RBP2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 MEX3CQ5U5Q3 659 aaKnown RBP2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 TRIM72Q6ZMU5 477 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 TTC7BQ86TV6 843 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 PSD4Q8NDX1 1056 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 JADE3Q92613 823 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 FAM136AQ96C01 138 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 VKORC1Q9BQB6 163 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 PUS7LQ9H0K6 701 aaKnown RBP2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 RLIMQ9NVW2 624 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 SELENONQ9NZV5 590 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 CFAP97Q9P2B7 532 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 PI4KBQ9UBF8 816 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 MCM8Q9UJA3 840 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 SH2B3Q9UQQ2 575 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 SQORQ9Y6N5 450 aa2.69□□□□□ -1.98
HMGB3P17-201ENST00000504195 CCDC154A6NI56 674 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 ZNF785A8K8V0 405 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 UBE2Q2LH0YL09 131 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 FCHO1O14526 889 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 XPOTO43592 962 aaKnown RBP2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 GJB1P08034 283 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 MALP21145 153 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 C5AR1P21730 350 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 LPOP22079 712 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 ZNF135P52742 658 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 PSMC1P62191 440 aaKnown RBP2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 KIF23Q02241 960 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 GHRHRQ02643 423 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 HABP2Q14520 560 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 C3orf36Q3SXR2 165 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 DAB2IPQ5VWQ8 1189 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 SDE2Q6IQ49 451 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 TAF2Q6P1X5 1199 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 GIMAP6Q6P9H5 292 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 SLC4A10Q6U841 1118 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 ZNF813Q6ZN06 617 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 RFX6Q8HWS3 928 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 CNTD1Q8N815 330 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 KLHDC4Q8TBB5 520 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 PUS7Q96PZ0 661 aaKnown RBP2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 TMX1Q9H3N1 280 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 SMOC2Q9H3U7 446 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 TRMT13Q9NUP7 481 aaKnown RBP2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 ETAA1Q9NY74 926 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 SLC5A4Q9NY91 659 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 DLL3Q9NYJ7 618 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 DKK3Q9UBP4 350 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 SCAF8Q9UPN6 1271 aaKnown RBP2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 LIMCH1Q9UPQ0 1083 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 IPPQ9Y573 584 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 MRFAP1Q9Y605 127 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 RAD54BQ9Y620 910 aa2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 CFAP20Q9Y6A4 193 aaKnown RBP2.68□□□□□ -1.98
HMGB3P17-201ENST00000504195 PHLDB1Q86UU1 1377 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 LOC105371045A0A1W2PR82 267 aa2.67□□□□□ -1.98
HMGB3P17-201ENST00000504195 LACTBL1A8MY62 500 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms