RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 MAN1A1P33908 653 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 PAFAH1B1P43034 410 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 PLA2G4AP47712 749 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 ALDH7A1P49419 539 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 AMPD2Q01433 879 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 PTP4A2Q12974 167 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 PDCLQ13371 301 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 MAMLD1Q13495 774 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 PIGHQ14442 188 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 ACAP1Q15027 740 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 DCUN1D2Q6PH85 259 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 C4orf50Q6ZRC1 276 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 TMEM110Q86TL2 294 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 OSTM1Q86WC4 334 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 ZNF280BQ86YH2 543 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 CMTR2Q8IYT2 770 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 DCP1BQ8IZD4 617 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 TMEM130Q8N3G9 435 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 WDTC1Q8N5D0 677 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 C3orf58Q8NDZ4 430 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 FEZF2Q8TBJ5 459 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 MYCBPAPQ8TBZ2 947 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 FNIP1Q8TF40 1166 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 TRIM43Q96BQ3 446 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 DUSP16Q9BY84 665 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 UBXN6Q9BZV1 441 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 MTIF3Q9H2K0 278 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 ABCB6Q9NP58 842 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 IP6K2Q9UHH9 426 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 ANAPC7Q9UJX3 599 aa8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.59□□□□□ -1.03
TOPBP1-202ENST00000503338 CCDC66A2RUB6 948 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 OR6C75A6NL08 312 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 SIGLEC16A6NMB1 481 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 H7C4K7 107 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 ENC1O14682 589 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 NRP1O14786 923 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 SART1O43290 800 aaKnown RBP8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 SPOPO43791 374 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 FTCDO95954 541 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 GALTP07902 379 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 CFHP08603 1231 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 FAM200BP0CF97 657 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 KRT3P12035 628 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 NPR3P17342 541 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 EN2P19622 333 aaPredicted RBP8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 BRCC3P46736 316 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 RPL34P49207 117 aaKnown RBP8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 PSMC1P62191 440 aaKnown RBP8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 ORC1Q13415 861 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 NFE2Q16621 373 aaPredicted RBP8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 PTPN20Q4JDL3 420 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 INTS6LQ5JSJ4 861 aaKnown RBP8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 CCDC181Q5TID7 509 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 ZNF280DQ6N043 979 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 FAM171BQ6P995 826 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 PSRC1Q6PGN9 363 aaPredicted RBP8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 CD300LGQ6UXG3 332 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 ARCQ7LC44 396 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 NT5DC3Q86UY8 548 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 DNAAF5Q86Y56 855 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 C12orf29Q8N999 325 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 MYRIPQ8NFW9 859 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 SLC2A14Q8TDB8 520 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 SLC35F5Q8WV83 523 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 KCTD13Q8WZ19 329 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 ZNF689Q96CS4 500 aaPredicted RBP8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 MCRS1Q96EZ8 462 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 SMARCD1Q96GM5 515 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 HES6Q96HZ4 224 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 FUBP3Q96I24 572 aaKnown RBP eCLIP8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 CPXM1Q96SM3 734 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 OSBPL9Q96SU4 736 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 NAP1L3Q99457 506 aaPredicted RBP8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 PAAF1Q9BRP4 392 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 MED10Q9BTT4 135 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 TLR10Q9BXR5 811 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 SLC4A5Q9BY07 1137 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 DPEP3Q9H4B8 488 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 PNPLA8Q9NP80 782 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 ST7Q9NRC1 585 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 AAASQ9NRG9 546 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 FAM49BQ9NUQ9 324 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 COG5Q9UP83 839 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 ALG6Q9Y672 507 aa8.58□□□□□ -1.04
TOPBP1-202ENST00000503338 PCNTO95613 3336 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 TCRBV5S1A1TA0A578 114 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 TMEM191CA6NGB0 347 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 RIOK3O14730 519 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 FANCGO15287 622 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 ATMINO43313 823 aaPredicted RBP8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 PROSCO94903 275 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 FBXO21O94952 628 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 FGBP02675 491 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 ERBB2P04626 1255 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 LAG3P18627 525 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 CTNNA2P26232 953 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 ADORA2BP29275 332 aa8.57□□□□□ -1.04
TOPBP1-202ENST00000503338 SSTR3P32745 418 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms