RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 C2CD2Q9Y426 696 aa12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 HAS3O00219 553 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 PAEPP09466 180 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 ZNF865P0CJ78 1059 aaPredicted RBP12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 STAG3L1P0CL83 205 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 MMP8P22894 467 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 STIP1P31948 543 aaKnown RBP12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 DRG2P55039 364 aaKnown RBP12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 TRPC3Q13507 836 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 ZNF699Q32M78 642 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 AADACL2Q6P093 401 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 CCT6BQ92526 530 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 CYP3A43Q9HB55 503 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 DNAAF2Q9NVR5 837 aaKnown RBP12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 PCYOX1Q9UHG3 505 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 SIX4Q9UIU6 781 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 SMIM35A0A1B0GVV1 85 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 ADCY6O43306 1168 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 ATMINO43313 823 aaPredicted RBP12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 PHF2O75151 1096 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 ATP6V1G1O75348 118 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 PROSCO94903 275 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 CHN1P15882 459 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 GRM5P41594 1212 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 SLCO1A2P46721 670 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 PLTPP55058 493 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 IFI35P80217 286 aaPredicted RBP12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 MESDQ14696 234 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 NAA25Q14CX7 972 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 ACCSLQ4AC99 568 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 SPDYCQ5MJ68 293 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 C17orf99Q6UX52 265 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 TTC39CQ8N584 583 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 ZNF606Q8WXB4 792 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 KRT35Q92764 455 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 SLCO2A1Q92959 643 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 XPO6Q96QU8 1125 aaKnown RBP12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 LHX5Q9H2C1 402 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 CISHQ9NSE2 258 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 UTP11Q9Y3A2 253 aaKnown RBP12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 NRCAMQ92823 1304 aa12.2□□□□□ -0.46
SNRNP200-208ENST00000497539 PSTPIP1O43586 416 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 CALB1P05937 261 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 ARF4P18085 180 aaPredicted RBP12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 RRM1P23921 792 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 HOXC8P31273 242 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 CHRNA3P32297 505 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 IFNAR2P48551 515 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 ADAM17P78536 824 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 TAP1Q03518 808 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 FAM133BQ5BKY9 247 aaKnown RBP12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 SEL1L2Q5TEA6 688 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 AGBL2Q5U5Z8 902 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 SLC35B4Q969S0 331 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 ELMO3Q96BJ8 720 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 FAM129AQ9BZQ8 928 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 PLEKHA5Q9HAU0 1116 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 ERVK-5Q9HDB9 667 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 FAM114A2Q9NRY5 505 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 ITGA11Q9UKX5 1188 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 AKT3Q9Y243 479 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 SNX24Q9Y343 169 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 LACTBL1A8MY62 500 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 IGF2BP3O00425 579 aaKnown RBP eCLIP12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 RNF8O76064 485 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 CXCL8P10145 99 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 GBP1P32455 592 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 MAMLD1Q13495 774 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 MTMR3Q13615 1198 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 SIX1Q15475 284 aaPredicted RBP12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 THNSL1Q8IYQ7 743 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 C1orf127Q8N9H9 656 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 SOCS4Q8WXH5 440 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 CHMP6Q96FZ7 201 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 FMO2Q99518 471 aa12.19□□□□□ -0.46
SNRNP200-208ENST00000497539 C5orf60A6NFR6 353 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 FSCN2O14926 492 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 THAP12O43422 761 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 GPR32O75388 356 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 KRT38O76015 456 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 MARCKSL1P49006 195 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 IGBP1P78318 339 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 TFAMQ00059 246 aaKnown RBP12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 CCDC38Q502W7 563 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 LRRC23Q53EV4 343 aaPredicted RBP12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 PPP1R15BQ5SWA1 713 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 SCARA3Q6AZY7 606 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 TBC1D1Q86TI0 1168 aaPredicted RBP12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 SLC13A5Q86YT5 568 aaPredicted RBP12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 LRRC34Q8IZ02 419 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 MAIP1Q8WWC4 291 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 CPA5Q8WXQ8 436 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 ELAC2Q9BQ52 826 aaKnown RBP12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 PLVAPQ9BX97 442 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 RAB17Q9H0T7 212 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 PARVAQ9NVD7 372 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 CHORDC1Q9UHD1 332 aaPredicted RBP12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 SRRM3A6NNA2 597 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms