RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 TJP3O95049 919 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 CYP2D6P10635 497 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 HDCP19113 662 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 CLCN2P51788 898 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 CYP4F2P78329 520 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 HOXA4Q00056 320 aaPredicted RBP4.44□□□□□ -1.7
CBX3-208ENST00000497498 SUPT20HL1Q3ZLR7 823 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 PCID2Q5JVF3 399 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 LAYNQ6UX15 382 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 PARS2Q7L3T8 475 aaKnown RBP4.44□□□□□ -1.7
CBX3-208ENST00000497498 CATIPQ7Z7H3 387 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 BRIX1Q8TDN6 353 aaKnown RBP4.44□□□□□ -1.7
CBX3-208ENST00000497498 ATG4AQ8WYN0 398 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 ZNF48Q96MX3 618 aaPredicted RBP4.44□□□□□ -1.7
CBX3-208ENST00000497498 PUS7Q96PZ0 661 aaKnown RBP4.44□□□□□ -1.7
CBX3-208ENST00000497498 SMAD5Q99717 465 aaKnown RBP4.44□□□□□ -1.7
CBX3-208ENST00000497498 TTYH3Q9C0H2 523 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 PLEKHM1Q9Y4G2 1056 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 H3BUI4 141 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 FESP07332 822 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 SFPQP23246 707 aaKnown RBP eCLIP4.43□□□□□ -1.7
CBX3-208ENST00000497498 AKAP5P24588 427 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 VIPR2P41587 438 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 LILRA4P59901 499 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 AMOTQ4VCS5 1084 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 ARHGAP40Q5TG30 622 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 SLC9A4Q6AI14 798 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 CATSPERGQ6ZRH7 1159 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 ZBTB9Q96C00 473 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 MVB12AQ96EY5 273 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 SLC35A4Q96G79 324 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 MOGAT1Q96PD6 335 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 SH2D3AQ9BRG2 576 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 GTPBP4Q9BZE4 634 aaKnown RBP4.43□□□□□ -1.7
CBX3-208ENST00000497498 TCF7L1Q9HCS4 588 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 ADAMTS5Q9UNA0 930 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 ZNF521Q96K83 1311 aa4.43□□□□□ -1.7
CBX3-208ENST00000497498 A1L4Q6 167 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 UNC5CO95185 931 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 TOP3BO95985 862 aaKnown RBP4.42□□□□□ -1.7
CBX3-208ENST00000497498 IGKV2-30P06310 120 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 ENGP17813 658 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 SOX8P57073 446 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 E2F2Q14209 437 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 NAPRTQ6XQN6 538 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 CHSY1Q86X52 802 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 GALNT16Q8N428 558 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 LRRC71Q8N4P6 559 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 C8orf58Q8NAV2 365 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 DENND1AQ8TEH3 1009 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 GLG1Q92896 1179 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 HSPBAP1Q96EW2 488 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 NUP88Q99567 741 aaPredicted RBP4.42□□□□□ -1.7
CBX3-208ENST00000497498 MACROD1Q9BQ69 325 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 THAP7Q9BT49 309 aaPredicted RBP4.42□□□□□ -1.7
CBX3-208ENST00000497498 PRSS22Q9GZN4 317 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 GLOD4Q9HC38 313 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 NDRG4Q9ULP0 352 aaKnown RBP4.42□□□□□ -1.7
CBX3-208ENST00000497498 GABRQQ9UN88 632 aa4.42□□□□□ -1.7
CBX3-208ENST00000497498 CYP2D7A0A087X1C5 515 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 H7C1Q1 480 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 IL33O95760 270 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 BMP15O95972 392 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 GRPP07492 148 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 NPSP0C0P6 89 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 PDE1AP54750 535 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 GTF2H3Q13889 308 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 DAZAP2Q15038 168 aaPredicted RBP4.41□□□□□ -1.7
CBX3-208ENST00000497498 RGS7BPQ6MZT1 257 aaPredicted RBP4.41□□□□□ -1.7
CBX3-208ENST00000497498 MTHFD1LQ6UB35 978 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 TRIM72Q6ZMU5 477 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 Q6ZWC4 215 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 PCSK9Q8NBP7 692 aaKnown RBP4.41□□□□□ -1.7
CBX3-208ENST00000497498 CYP2W1Q8TAV3 490 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 CHMP4CQ96CF2 233 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 CDK5RAP3Q96JB5 506 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 ASB2Q96Q27 587 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 KRTAP1-5Q9BYS1 174 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 PCDH12Q9NPG4 1184 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 PCDHA6Q9UN73 950 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 TBC1D30Q9Y2I9 924 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 MED16Q9Y2X0 877 aa4.41□□□□□ -1.7
CBX3-208ENST00000497498 LUC7L2Q9Y383 392 aaKnown RBP4.41□□□□□ -1.7
CBX3-208ENST00000497498 SMIM35A0A1B0GVV1 85 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 PPEF2O14830 753 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 ALDH2P05091 517 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 CSF1RP07333 972 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 VCAM1P19320 739 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 TBC1D25Q3MII6 688 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 CCDC157Q569K6 752 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 KHDC1LQ5JSQ8 128 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 SLC2A7Q6PXP3 512 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 CELF5Q8N6W0 485 aaKnown RBP4.4□□□□□ -1.71
CBX3-208ENST00000497498 PNLDC1Q8NA58 520 aaKnown RBP4.4□□□□□ -1.71
CBX3-208ENST00000497498 SOCS4Q8WXH5 440 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 HPS3Q969F9 1004 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 R3HDM4Q96D70 268 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 RITA1Q96K30 269 aa4.4□□□□□ -1.71
CBX3-208ENST00000497498 SARS2Q9NP81 518 aaKnown RBP4.4□□□□□ -1.71
CBX3-208ENST00000497498 XPR1Q9UBH6 696 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms