RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 TBC1D5Q92609 795 aa5.3□□□□□ -1.56
TRIM4-205ENST00000496896 RUNDC1Q96C34 613 aa5.3□□□□□ -1.56
TRIM4-205ENST00000496896 TTYH3Q9C0H2 523 aa5.3□□□□□ -1.56
TRIM4-205ENST00000496896 TMEM60Q9H2L4 133 aa5.3□□□□□ -1.56
TRIM4-205ENST00000496896 ARMT1Q9H993 441 aa5.3□□□□□ -1.56
TRIM4-205ENST00000496896 SERHLQ9NQF3 203 aa5.3□□□□□ -1.56
TRIM4-205ENST00000496896 ANLNQ9NQW6 1124 aa5.3□□□□□ -1.56
TRIM4-205ENST00000496896 ARHGEF3Q9NR81 526 aa5.3□□□□□ -1.56
TRIM4-205ENST00000496896 XPR1Q9UBH6 696 aa5.3□□□□□ -1.56
TRIM4-205ENST00000496896 DKK3Q9UBP4 350 aa5.3□□□□□ -1.56
TRIM4-205ENST00000496896 SSX2IPQ9Y2D8 614 aa5.3□□□□□ -1.56
TRIM4-205ENST00000496896 TMX2Q9Y320 296 aa5.3□□□□□ -1.56
TRIM4-205ENST00000496896 A0A087WWL8 130 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 PPM1DO15297 605 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 TUSC2O75896 110 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 ERBB2P04626 1255 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 ALDH9A1P49189 494 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 SLC11A2P49281 568 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 FOXF2Q12947 444 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 FAM102BQ5T8I3 360 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 KIAA1614Q5VZ46 1190 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 GAS2L3Q86XJ1 694 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 SRRM1Q8IYB3 904 aaKnown RBP5.29□□□□□ -1.56
TRIM4-205ENST00000496896 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.29□□□□□ -1.56
TRIM4-205ENST00000496896 CELF5Q8N6W0 485 aaKnown RBP5.29□□□□□ -1.56
TRIM4-205ENST00000496896 PCSK9Q8NBP7 692 aaKnown RBP5.29□□□□□ -1.56
TRIM4-205ENST00000496896 ANKS1AQ92625 1134 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 MESP1Q9BRJ9 268 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 CPA4Q9UI42 421 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 ADAM21Q9UKJ8 722 aa5.29□□□□□ -1.56
TRIM4-205ENST00000496896 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.29□□□□□ -1.56
TRIM4-205ENST00000496896 AOX1Q06278 1338 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 A0A1W2PPL8 197 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 WIPF3A6NGB9 483 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 FAM227AF5H4B4 570 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 MYO1CO00159 1063 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 ERC2O15083 957 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 PHGDHO43175 533 aaKnown RBP5.28□□□□□ -1.56
TRIM4-205ENST00000496896 IL6RP08887 468 aaPredicted RBP5.28□□□□□ -1.56
TRIM4-205ENST00000496896 JUPP14923 745 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 NPR1P16066 1061 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 ITGB6P18564 788 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 UCP3P55916 312 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 LILRA4P59901 499 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 E2F2Q14209 437 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 AARS2Q5JTZ9 985 aaKnown RBP5.28□□□□□ -1.56
TRIM4-205ENST00000496896 LMBRD2Q68DH5 695 aaPredicted RBP5.28□□□□□ -1.56
TRIM4-205ENST00000496896 SUMO4Q6EEV6 95 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 ZNF783Q6ZMS7 281 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 ZNF804AQ7Z570 1209 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 RASAL3Q86YV0 1011 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 ZBTB34Q8NCN2 500 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 LRGUKQ96M69 825 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 ST3GAL5Q9UNP4 418 aa5.28□□□□□ -1.56
TRIM4-205ENST00000496896 FRS3O43559 492 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 MARCH6O60337 910 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 CTNND1O60716 968 aaKnown RBP5.27□□□□□ -1.57
TRIM4-205ENST00000496896 TJP3O95049 919 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 PRKCGP05129 697 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 FAM163BP0C2L3 166 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 EBLN1P0CF75 366 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 NDUFB7P17568 137 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 EN2P19622 333 aaPredicted RBP5.27□□□□□ -1.57
TRIM4-205ENST00000496896 MINDY4Q4G0A6 757 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 ARHGAP40Q5TG30 622 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 CEP85Q6P2H3 762 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 OVCH2Q7RTZ1 564 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 MAVSQ7Z434 540 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 TCEAL8Q8IYN2 117 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 CHPFQ8IZ52 775 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 KIAA0319LQ8IZA0 1049 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 SEMA6DQ8NFY4 1073 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 OR6B3Q8NGW1 331 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 RP9Q8TA86 221 aaKnown RBP5.27□□□□□ -1.57
TRIM4-205ENST00000496896 PPP1R35Q8TAP8 253 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 ATG4AQ8WYN0 398 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 SUCLG2Q96I99 432 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 P2RX7Q99572 595 aaKnown RBP5.27□□□□□ -1.57
TRIM4-205ENST00000496896 C1orf112Q9NSG2 853 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 RGS17Q9UGC6 210 aaPredicted RBP5.27□□□□□ -1.57
TRIM4-205ENST00000496896 SERTAD3Q9UJW9 196 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 NDRG4Q9ULP0 352 aaKnown RBP5.27□□□□□ -1.57
TRIM4-205ENST00000496896 PADI4Q9UM07 663 aa5.27□□□□□ -1.57
TRIM4-205ENST00000496896 LOC105371045A0A1W2PR82 267 aa5.26□□□□□ -1.57
TRIM4-205ENST00000496896 TARM1B6A8C7 271 aa5.26□□□□□ -1.57
TRIM4-205ENST00000496896 BTN3A1O00481 513 aa5.26□□□□□ -1.57
TRIM4-205ENST00000496896 JTBO76095 146 aa5.26□□□□□ -1.57
TRIM4-205ENST00000496896 S100BP04271 92 aaPredicted RBP5.26□□□□□ -1.57
TRIM4-205ENST00000496896 CDK4P11802 303 aa5.26□□□□□ -1.57
TRIM4-205ENST00000496896 EIF2B5Q13144 721 aaKnown RBP5.26□□□□□ -1.57
TRIM4-205ENST00000496896 MGAT5BQ3V5L5 792 aa5.26□□□□□ -1.57
TRIM4-205ENST00000496896 RGS7BPQ6MZT1 257 aaPredicted RBP5.26□□□□□ -1.57
TRIM4-205ENST00000496896 MTHFD1LQ6UB35 978 aa5.26□□□□□ -1.57
TRIM4-205ENST00000496896 NPNTQ6UXI9 565 aa5.26□□□□□ -1.57
TRIM4-205ENST00000496896 MAEAQ7L5Y9 396 aa5.26□□□□□ -1.57
TRIM4-205ENST00000496896 AMIGO2Q86SJ2 522 aa5.26□□□□□ -1.57
TRIM4-205ENST00000496896 DNAJC5GQ8N7S2 189 aa5.26□□□□□ -1.57
TRIM4-205ENST00000496896 ZMAT3Q9HA38 289 aaKnown RBP5.26□□□□□ -1.57
TRIM4-205ENST00000496896 ATP6V0A4Q9HBG4 840 aa5.26□□□□□ -1.57
TRIM4-205ENST00000496896 FLRT1Q9NZU1 646 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms