RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SNRPFP62306 86 aaKnown RBP15.3■□□□□ 0.04
VTI1A-209ENST00000496445 STK4Q13043 487 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 MTAPQ13126 283 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 TAF12Q16514 161 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 KNOP1Q1ED39 458 aaKnown RBP15.3■□□□□ 0.04
VTI1A-209ENST00000496445 ZNF528Q3MIS6 628 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 CFAP221Q4G0U5 840 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 FAM171BQ6P995 826 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 DPH6Q7L8W6 267 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 HS2ST1Q7LGA3 356 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 ADSSL1Q8N142 457 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 RIN3Q8TB24 985 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 FAM3CQ92520 227 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 ZNF516Q92618 1163 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 MYLPFQ96A32 169 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 CCDC127Q96BQ5 260 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 SYT15Q9BQS2 421 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 CRTAC1Q9NQ79 661 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 FBXO4Q9UKT5 387 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 CCL26Q9Y258 94 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 DPYSL4O14531 572 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 NCAM2O15394 837 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 LMNAP02545 664 aaKnown RBP15.29■□□□□ 0.04
VTI1A-209ENST00000496445 CSH1P0DML2 217 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 CSH2P0DML3 217 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 TDGF1P13385 188 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 TNNI1P19237 187 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 WARSP23381 471 aaKnown RBP15.29■□□□□ 0.04
VTI1A-209ENST00000496445 CCNE1P24864 410 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 PCSK1P29120 753 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 CASP4P49662 377 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 MLLT6P55198 1093 aaPredicted RBP15.29■□□□□ 0.04
VTI1A-209ENST00000496445 CSTF1Q05048 431 aaKnown RBP15.29■□□□□ 0.04
VTI1A-209ENST00000496445 KMT5BQ4FZB7 885 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 ARHGAP29Q52LW3 1261 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 TXNDC8Q6A555 127 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 ZC3H14Q6PJT7 736 aaKnown RBP15.29■□□□□ 0.04
VTI1A-209ENST00000496445 TXNDC11Q6PKC3 985 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 TSSK4Q6SA08 328 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 CMTM8Q8IZV2 173 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 TTC8Q8TAM2 541 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 BPIFB1Q8TDL5 484 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 CSGALNACT1Q8TDX6 532 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 TRMT2BQ96GJ1 504 aaKnown RBP15.29■□□□□ 0.04
VTI1A-209ENST00000496445 FUBP3Q96I24 572 aaKnown RBP eCLIP15.29■□□□□ 0.04
VTI1A-209ENST00000496445 MRPL45Q9BRJ2 306 aaKnown RBP15.29■□□□□ 0.04
VTI1A-209ENST00000496445 CHRDQ9H2X0 955 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 GTSE1Q9NYZ3 720 aa15.29■□□□□ 0.04
VTI1A-209ENST00000496445 CGNQ9P2M7 1197 aaKnown RBP15.29■□□□□ 0.04
VTI1A-209ENST00000496445 MAGED2Q9UNF1 606 aaPredicted RBP15.29■□□□□ 0.04
VTI1A-209ENST00000496445 GPR179Q6PRD1 2367 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 CHRNB1P11230 501 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 CMA1P23946 247 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 DDX6P26196 483 aaKnown RBP eCLIP15.28■□□□□ 0.04
VTI1A-209ENST00000496445 RPL10AP62906 217 aaKnown RBP15.28■□□□□ 0.04
VTI1A-209ENST00000496445 KRT85P78386 507 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 TNK2Q07912 1038 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 SPATA2LQ8IUW3 424 aaPredicted RBP15.28■□□□□ 0.04
VTI1A-209ENST00000496445 MAB21L3Q8N8X9 362 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 NELL1Q92832 810 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 USP13Q92995 863 aaPredicted RBP15.28■□□□□ 0.04
VTI1A-209ENST00000496445 MSANTD3Q96H12 275 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 SPATA32Q96LK8 384 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 FNBP1Q96RU3 617 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 SEMA4AQ9H3S1 761 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 EXOC1Q9NV70 894 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 CDH9Q9ULB4 789 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 R3HCC1Q9Y3T6 440 aaKnown RBP15.28■□□□□ 0.04
VTI1A-209ENST00000496445 MYO16Q9Y6X6 1858 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 KIAA1549LQ6ZVL6 1849 aa15.28■□□□□ 0.04
VTI1A-209ENST00000496445 FAM237AA0A1B0GTK4 181 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 SPECC1L-ADORA2AF8WAN1 911 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 EXOC3O60645 756 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 TACC1O75410 805 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 STAU1O95793 577 aaKnown RBP15.27■□□□□ 0.04
VTI1A-209ENST00000496445 PDGFRBP09619 1106 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 CTHP32929 405 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 AVPR1AP37288 418 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 MAGEA11P43364 429 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 GAS6Q14393 721 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 C4orf50Q6ZRC1 276 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 CELF5Q8N6W0 485 aaKnown RBP15.27■□□□□ 0.04
VTI1A-209ENST00000496445 SUMF1Q8NBK3 374 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 CHFRQ96EP1 664 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 MYRFLQ96LU7 910 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 MMS19Q96T76 1030 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 XYLT2Q9H1B5 865 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 KCTD10Q9H3F6 313 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 C8orf33Q9H7E9 229 aaPredicted RBP15.27■□□□□ 0.04
VTI1A-209ENST00000496445 LMAN1LQ9HAT1 526 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 RBM12Q9NTZ6 932 aaKnown RBP15.27■□□□□ 0.04
VTI1A-209ENST00000496445 DMAC2Q9NW81 257 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 ZMYM5Q9UJ78 669 aa15.27■□□□□ 0.04
VTI1A-209ENST00000496445 LRRIQ3A6PVS8 624 aaPredicted RBP15.26■□□□□ 0.03
VTI1A-209ENST00000496445 BDNFP23560 247 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 NDUFA8P51970 172 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 KPNA1P52294 538 aaPredicted RBP15.26■□□□□ 0.03
VTI1A-209ENST00000496445 MYL6P60660 151 aa15.26■□□□□ 0.03
VTI1A-209ENST00000496445 PLCB2Q00722 1185 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms