RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 ASIC4Q96FT7 647 aa17.25■□□□□ 0.35
SATB1-217ENST00000493952 PCED1BQ96HM7 432 aa17.25■□□□□ 0.35
SATB1-217ENST00000493952 FUBP3Q96I24 572 aaKnown RBP eCLIP17.25■□□□□ 0.35
SATB1-217ENST00000493952 CEP63Q96MT8 703 aa17.25■□□□□ 0.35
SATB1-217ENST00000493952 RPP25Q9BUL9 199 aaKnown RBP17.25■□□□□ 0.35
SATB1-217ENST00000493952 GDE1Q9NZC3 331 aa17.25■□□□□ 0.35
SATB1-217ENST00000493952 ARMCX3Q9UH62 379 aaPredicted RBP17.25■□□□□ 0.35
SATB1-217ENST00000493952 DUSP12Q9UNI6 340 aa17.25■□□□□ 0.35
SATB1-217ENST00000493952 COL4A3Q01955 1670 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 A0A1W2PRU2 124 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 BICDL2A1A5D9 508 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 TMEM221A6NGB7 291 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 M0R296 226 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 P4HA1P13674 534 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 CYP27A1Q02318 531 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 TEAD2Q15562 447 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 MAPRE1Q15691 268 aaKnown RBP17.24■□□□□ 0.35
SATB1-217ENST00000493952 DDR2Q16832 855 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 SDHAF4Q5VUM1 108 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 MTSS1LQ765P7 747 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 B3GALNT2Q8NCR0 500 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 SEMA4DQ92854 862 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 ZSWIM3Q96MP5 696 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 IMPG2Q9BZV3 1241 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 NUP62CLQ9H1M0 184 aa17.24■□□□□ 0.35
SATB1-217ENST00000493952 APOBEC3GQ9HC16 384 aaKnown RBP17.24■□□□□ 0.35
SATB1-217ENST00000493952 MAGEC2Q9UBF1 373 aaPredicted RBP17.24■□□□□ 0.35
SATB1-217ENST00000493952 STX10O60499 249 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 HMGA1P17096 107 aaKnown RBP17.23■□□□□ 0.35
SATB1-217ENST00000493952 PTPN1P18031 435 aaKnown RBP17.23■□□□□ 0.35
SATB1-217ENST00000493952 BDNFP23560 247 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 GABRR2P28476 465 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 RPL10AP62906 217 aaKnown RBP17.23■□□□□ 0.35
SATB1-217ENST00000493952 CBWD6Q4V339 395 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 CBWD3Q5JTY5 395 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 CBWD5Q5RIA9 395 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 HFE2Q6ZVN8 426 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 GAREM2Q75VX8 874 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 FILIP1Q7Z7B0 1213 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 FBXL13Q8NEE6 735 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 SLC35C1Q96A29 364 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 KXD1Q9BQD3 176 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 BCO2Q9BYV7 579 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 IL21Q9HBE4 155 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 HMGXB4Q9UGU5 601 aa17.23■□□□□ 0.35
SATB1-217ENST00000493952 FCARP24071 287 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 MAGEA11P43364 429 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 TAF12Q16514 161 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 CCDC40Q4G0X9 1142 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 FAM78AQ5JUQ0 283 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 STXBP5Q5T5C0 1151 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 FRMD5Q7Z6J6 570 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 SCN4BQ8IWT1 228 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 GPT2Q8TD30 523 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 ASB16Q96NS5 453 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 NIF3L1Q9GZT8 377 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 ATXN3LQ9H3M9 355 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 METTL14Q9HCE5 456 aaKnown RBP17.22■□□□□ 0.35
SATB1-217ENST00000493952 RAB20Q9NX57 234 aa17.22■□□□□ 0.35
SATB1-217ENST00000493952 NOL4O94818 638 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 FGF19O95750 216 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 PDGFBP01127 241 aaPredicted RBP17.21■□□□□ 0.35
SATB1-217ENST00000493952 CSH1P0DML2 217 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 CSH2P0DML3 217 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 SRFP11831 508 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 NDST1P52848 882 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 ORC1Q13415 861 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 TANGO2Q6ICL3 276 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 VSTM1Q6UX27 236 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 BMP8AQ7Z5Y6 402 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 CCDC150Q8NCX0 1101 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 ZSCAN18Q8TBC5 510 aaPredicted RBP17.21■□□□□ 0.35
SATB1-217ENST00000493952 MED15Q96RN5 788 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 B3GNT5Q9BYG0 378 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 PLA2G2FQ9BZM2 168 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 ZNF518BQ9C0D4 1074 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 TMEM30AQ9NV96 361 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 MAGED2Q9UNF1 606 aaPredicted RBP17.21■□□□□ 0.35
SATB1-217ENST00000493952 COQ4Q9Y3A0 265 aa17.21■□□□□ 0.35
SATB1-217ENST00000493952 ZDBF2Q9HCK1 2354 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 SLC38A8A6NNN8 435 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 CLDN5O00501 218 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 ECI2O75521 394 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 CFHP08603 1231 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 CDC25CP30307 473 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 GRIK1P39086 918 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 CACNA2D1P54289 1103 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 NLRP12P59046 1061 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 CYP4F8P98187 520 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 INCA1Q0VD86 236 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 GPR158Q5T848 1215 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 TMEM150AQ86TG1 271 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 ACOT1Q86TX2 421 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 SMARCD2Q92925 531 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 PBXIP1Q96AQ6 731 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 ELSPBP1Q96BH3 223 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 TNIP3Q96KP6 325 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 TWNKQ96RR1 684 aa17.2■□□□□ 0.34
SATB1-217ENST00000493952 SRRTQ9BXP5 876 aaKnown RBP17.2■□□□□ 0.34
SATB1-217ENST00000493952 GPR88Q9GZN0 384 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms