RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 ELAVL2Q12926 359 aaKnown RBP13.41□□□□□ -0.26
VPS52-220ENST00000493674 CCDC142Q17RM4 750 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 GOLGA7BQ2TAP0 167 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 INTS6LQ5JSJ4 861 aaKnown RBP13.41□□□□□ -0.26
VPS52-220ENST00000493674 OVOS1Q6IE37 1185 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 FAM171BQ6P995 826 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 PAQR9Q6ZVX9 377 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 OTOP2Q7RTS6 562 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 TMCO2Q7Z6W1 182 aaPredicted RBP13.41□□□□□ -0.26
VPS52-220ENST00000493674 METTL23Q86XA0 190 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 FUKQ8N0W3 1084 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
VPS52-220ENST00000493674 SECISBP2LQ93073 1101 aaKnown RBP13.41□□□□□ -0.26
VPS52-220ENST00000493674 CALR3Q96L12 384 aaKnown RBP13.41□□□□□ -0.26
VPS52-220ENST00000493674 WDR24Q96S15 920 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 LPIN3Q9BQK8 851 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 GPR62Q9BZJ7 368 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 UBE2OQ9C0C9 1292 aaKnown RBP13.41□□□□□ -0.26
VPS52-220ENST00000493674 FAM49BQ9NUQ9 324 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 CXXC1Q9P0U4 656 aaPredicted RBP13.41□□□□□ -0.26
VPS52-220ENST00000493674 FAN1Q9Y2M0 1017 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 CEP83Q9Y592 693 aa13.41□□□□□ -0.26
VPS52-220ENST00000493674 TIMM13Q9Y5L4 95 aaPredicted RBP13.41□□□□□ -0.26
VPS52-220ENST00000493674 MACROD2A1Z1Q3 448 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 TBC1D4O60343 1298 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 TNNT1P13805 278 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 ABCB4P21439 1286 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 ACAT1P24752 427 aaKnown RBP13.4□□□□□ -0.26
VPS52-220ENST00000493674 BCAT1P54687 386 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 PSMC1P62191 440 aaKnown RBP13.4□□□□□ -0.26
VPS52-220ENST00000493674 PLCB3Q01970 1234 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 PDCLQ13371 301 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 PTPN20Q4JDL3 420 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 PLEKHA7Q6IQ23 1121 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 FUT10Q6P4F1 479 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.4□□□□□ -0.26
VPS52-220ENST00000493674 RHOT2Q8IXI1 618 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 TDHQ8IZJ6 230 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 SLC35F6Q8N357 371 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 LRRC57Q8N9N7 239 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 ANKRD52Q8NB46 1076 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 OR10T2Q8NGX3 314 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 TPCN2Q8NHX9 752 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 MYCBPAPQ8TBZ2 947 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 STK32AQ8WU08 396 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 SLC35F5Q8WV83 523 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 ZNF653Q96CK0 615 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 SLC9A7Q96T83 725 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 B3GNT5Q9BYG0 378 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 PDCL3Q9H2J4 239 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 CYLDQ9NQC7 956 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 UVRAGQ9P2Y5 699 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 COG5Q9UP83 839 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 COLQQ9Y215 455 aaPredicted RBP13.4□□□□□ -0.26
VPS52-220ENST00000493674 PAXBP1Q9Y5B6 917 aa13.4□□□□□ -0.26
VPS52-220ENST00000493674 MRPL42Q9Y6G3 142 aaKnown RBP13.4□□□□□ -0.26
VPS52-220ENST00000493674 MYBPHLA2RUH7 354 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 GRID2IPA4D2P6 1211 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 TADA2AO75478 443 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 MOCS3O95396 460 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 CALB1P05937 261 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 LAG3P18627 525 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 GNG11P61952 73 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 YWHAHQ04917 246 aaPredicted RBP13.39□□□□□ -0.27
VPS52-220ENST00000493674 BST2Q10589 180 aaKnown RBP13.39□□□□□ -0.27
VPS52-220ENST00000493674 MDH1BQ5I0G3 518 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 ZNF569Q5MCW4 686 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
VPS52-220ENST00000493674 PPP1R15BQ5SWA1 713 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 KCNT2Q6UVM3 1135 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 MMS22LQ6ZRQ5 1243 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 SLFN11Q7Z7L1 901 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 SLC39A11Q8N1S5 342 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 COLGALT1Q8NBJ5 622 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 TRIM58Q8NG06 486 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 SLC35G2Q8TBE7 412 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 PHOSPHO2Q8TCD6 241 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 SLC2A14Q8TDB8 520 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 IGSF21Q96ID5 467 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 NOX5Q96PH1 765 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 CPXM1Q96SM3 734 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 C11orf70Q9BRQ4 267 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 SLC4A5Q9BY07 1137 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 ZCWPW1Q9H0M4 648 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 ADAM22Q9P0K1 906 aa13.39□□□□□ -0.27
VPS52-220ENST00000493674 CNOT8Q9UFF9 292 aaKnown RBP13.39□□□□□ -0.27
VPS52-220ENST00000493674 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
VPS52-220ENST00000493674 BUB1O43683 1085 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 GABBR2O75899 941 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 RRM1P23921 792 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 PBX3P40426 434 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 PLA2G4AP47712 749 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 PDE4CQ08493 712 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 BTG3Q14201 252 aaPredicted RBP13.38□□□□□ -0.27
VPS52-220ENST00000493674 IFI16Q16666 785 aaKnown RBP13.38□□□□□ -0.27
VPS52-220ENST00000493674 FAM171A1Q5VUB5 890 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 SYT10Q6XYQ8 523 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 FAM35AQ86V20 835 aa13.38□□□□□ -0.27
VPS52-220ENST00000493674 ERICH1Q86X53 443 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms