RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 MYLK3Q32MK0 819 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 DNAL1Q4LDG9 190 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 EFHC1Q5JVL4 640 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 FNBP1LQ5T0N5 605 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 DDX1Q92499 740 aaKnown RBP12.26□□□□□ -0.45
HDAC4-210ENST00000493582 RILPQ96NA2 401 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 VAV3Q9UKW4 847 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 TMEM221A6NGB7 291 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 C6orf222P0C671 652 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-210ENST00000493582 DHRS4L1P0CG22 281 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 SERPINB6P35237 376 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 AQP5P55064 265 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 GSTO1P78417 241 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 SULT2A1Q06520 285 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 HIF1AQ16665 826 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 TBC1D10BQ4KMP7 808 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-210ENST00000493582 RNASEH2BQ5TBB1 312 aaKnown RBP12.25□□□□□ -0.45
HDAC4-210ENST00000493582 LRRC8BQ6P9F7 803 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 POU5F2Q8N7G0 328 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 DCAKDQ8WVC6 231 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 SHC3Q92529 594 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 ACAP3Q96P50 834 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 TMEM121Q9BTD3 319 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 UBAP1Q9NZ09 502 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 SH3GLB1Q9Y371 365 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 CCDC195A0A1B0GUA6 201 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 SLURP2P0DP57 97 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 KRT5P13647 590 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 EIF4BP23588 611 aaKnown RBP12.25□□□□□ -0.45
HDAC4-210ENST00000493582 VARSP26640 1264 aaKnown RBP12.25□□□□□ -0.45
HDAC4-210ENST00000493582 SSTR3P32745 418 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-210ENST00000493582 MFAP3P55082 362 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 ZNF200P98182 395 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-210ENST00000493582 PICALMQ13492 652 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 DCTN2Q13561 401 aaKnown RBP12.25□□□□□ -0.45
HDAC4-210ENST00000493582 KLHL35Q6PF15 583 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 SMIM5Q71RC9 77 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 TMC7Q7Z402 723 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 MCOLN2Q8IZK6 566 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 RIN3Q8TB24 985 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 CCDC127Q96BQ5 260 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 SHCBP1LQ9BZQ2 653 aa12.25□□□□□ -0.45
HDAC4-210ENST00000493582 STIP1P31948 543 aaKnown RBP12.24□□□□□ -0.45
HDAC4-210ENST00000493582 CCNIQ14094 377 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 GK3PQ14409 553 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 MORF4L2Q15014 288 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 CLEC16AQ2KHT3 1053 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 CES4AQ5XG92 561 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 FAM91A1Q658Y4 838 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 AAGABQ6PD74 315 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 CDHR3Q6ZTQ4 885 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 ADGRG6Q86SQ4 1221 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 RHPN2Q8IUC4 686 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 CRYGNQ8WXF5 182 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 HSD17B14Q9BPX1 270 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 EBF4Q9BQW3 602 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 SIKE1Q9BRV8 207 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 WDR83Q9BRX9 315 aaKnown RBP12.24□□□□□ -0.45
HDAC4-210ENST00000493582 APPL1Q9UKG1 709 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 STRIP2Q9ULQ0 834 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 PAIP2BQ9ULR5 123 aaKnown RBP12.24□□□□□ -0.45
HDAC4-210ENST00000493582 LDHCP07864 332 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 TCF4P15884 667 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 PMLP29590 882 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 HOXA13P31271 388 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-210ENST00000493582 CPOXP36551 454 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 BST1Q10588 318 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 RABGAP1LQ5R372 815 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 MAP3K21Q5TCX8 1036 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 ANKRD22Q5VYY1 191 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 IYDQ6PHW0 289 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 PTF1AQ7RTS3 328 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 RHOT1Q8IXI2 618 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 ALLCQ8N6M5 410 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 ICA1LQ8NDH6 482 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 ALKBH8Q96BT7 664 aaKnown RBP12.24□□□□□ -0.45
HDAC4-210ENST00000493582 CCDC106Q9BWC9 280 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 KCNK4Q9NYG8 393 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 DDX60LQ5H9U9 1706 aaKnown RBP12.24□□□□□ -0.45
HDAC4-210ENST00000493582 SGK1O00141 431 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 RAG1P15918 1043 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 SLC5A2P31639 672 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 ACAP1Q15027 740 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 USH1GQ495M9 461 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 FAM182AQ5T1J6 154 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 KYAT3Q6YP21 454 aaKnown RBP12.24□□□□□ -0.45
HDAC4-210ENST00000493582 STXBP4Q6ZWJ1 553 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 CHSY1Q86X52 802 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 PALM2Q8IXS6 379 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 FBXO36Q8NEA4 188 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 ACSF2Q96CM8 615 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-210ENST00000493582 ACSS3Q9H6R3 686 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 CYP4F11Q9HBI6 524 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 GINM1Q9NU53 330 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 CNTN3Q9P232 1028 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 WRAP73Q9P2S5 460 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-210ENST00000493582 SOX13Q9UN79 622 aa12.24□□□□□ -0.45
HDAC4-210ENST00000493582 TAF1LQ8IZX4 1826 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 TTLL13PA6NNM8 815 aa12.23□□□□□ -0.45
HDAC4-210ENST00000493582 H3BSA7 217 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms