RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 RPF1Q9H9Y2 349 aaKnown RBP7.29□□□□□ -1.24
VPS52-219ENST00000493379 RXFP1Q9HBX9 757 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 NGRNQ9NPE2 291 aaKnown RBP7.29□□□□□ -1.24
VPS52-219ENST00000493379 PUF60Q9UHX1 559 aaKnown RBP7.29□□□□□ -1.24
VPS52-219ENST00000493379 GDAQ9Y2T3 454 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 DOPEY1Q5JWR5 2465 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 LAMA5O15230 3695 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 NLRC5Q86WI3 1866 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 ZNF233A6NK53 670 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 IKBKBO14920 756 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 TBC1D4O60343 1298 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 KINO60870 393 aaKnown RBP7.28□□□□□ -1.24
VPS52-219ENST00000493379 SOD2P04179 222 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 FAM163BP0C2L3 166 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 CXCL8P10145 99 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 CTSAP10619 480 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 PRCPP42785 496 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 ACOT2P49753 483 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 ERVFC1P60507 584 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 DSG1Q02413 1049 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 RNASELQ05823 741 aaKnown RBP7.28□□□□□ -1.24
VPS52-219ENST00000493379 SURF1Q15526 300 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 PTPROQ16827 1216 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 CT47A1Q5JQC4 288 aaPredicted RBP7.28□□□□□ -1.24
VPS52-219ENST00000493379 N4BP2L1Q5TBK1 243 aaPredicted RBP7.28□□□□□ -1.24
VPS52-219ENST00000493379 ARMCX5Q6P1M9 558 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 XKR5Q6UX68 686 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 UNQ6494/PRO21346Q6UXR6 183 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 LIMS2Q7Z4I7 341 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 TRIM46Q7Z4K8 759 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 SYCP3Q8IZU3 236 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 GPD1LQ8N335 351 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 XXYLT1Q8NBI6 393 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 SUMF1Q8NBK3 374 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 KREMEN2Q8NCW0 462 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 ZSWIM2Q8NEG5 633 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 GPT2Q8TD30 523 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 FBF1Q8TES7 1133 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 BCL7CQ8WUZ0 217 aaPredicted RBP7.28□□□□□ -1.24
VPS52-219ENST00000493379 SMARCE1Q969G3 411 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 DHTKD1Q96HY7 919 aaPredicted RBP7.28□□□□□ -1.24
VPS52-219ENST00000493379 MSLNLQ96KJ4 702 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 BBC3Q96PG8 261 aaPredicted RBP7.28□□□□□ -1.24
VPS52-219ENST00000493379 FAM193BQ96PV7 902 aaPredicted RBP7.28□□□□□ -1.24
VPS52-219ENST00000493379 RPS6KC1Q96S38 1066 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 CDCA3Q99618 268 aaPredicted RBP7.28□□□□□ -1.24
VPS52-219ENST00000493379 ZBP1Q9H171 429 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 DNAJC25Q9H1X3 360 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 CLSTN2Q9H4D0 955 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 NEUROD4Q9HD90 331 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 HSPBP1Q9NZL4 362 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 FNIP2Q9P278 1114 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 ANKFY1Q9P2R3 1169 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 MAN1B1Q9UKM7 699 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 ADAM28Q9UKQ2 775 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 UBQLN1Q9UMX0 589 aaKnown RBP7.28□□□□□ -1.24
VPS52-219ENST00000493379 INPP5FQ9Y2H2 1132 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 KCNMB2Q9Y691 235 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 MYH11P35749 1972 aa7.28□□□□□ -1.24
VPS52-219ENST00000493379 ABCA12Q86UK0 2595 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 ADAMTS20P59510 1910 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 A0A1W2PNR3 127 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 FSD2A1L4K1 749 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 FIGNL2A6NMB9 653 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 M0QZQ0 153 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 PMM2O15305 246 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 XPOTO43592 962 aaKnown RBP7.27□□□□□ -1.25
VPS52-219ENST00000493379 ZC3H11AO75152 810 aaKnown RBP eCLIP7.27□□□□□ -1.25
VPS52-219ENST00000493379 TNFRSF21O75509 655 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 FGFR3P22607 806 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 IGFBP6P24592 240 aaPredicted RBP7.27□□□□□ -1.25
VPS52-219ENST00000493379 CCNE1P24864 410 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 GNA15P30679 374 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 MCM4P33991 863 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 SMCPP49901 116 aaPredicted RBP7.27□□□□□ -1.25
VPS52-219ENST00000493379 CLCNKBP51801 687 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 OSTNP61366 133 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 PPP2R3AQ06190 1150 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 TYRO3Q06418 890 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 ELAVL2Q12926 359 aaKnown RBP7.27□□□□□ -1.25
VPS52-219ENST00000493379 ADAM15Q13444 863 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 PSMD6Q15008 389 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 TRIP4Q15650 581 aaPredicted RBP7.27□□□□□ -1.25
VPS52-219ENST00000493379 SEZ6Q53EL9 994 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 HS2ST1Q7LGA3 356 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 DTWD2Q8NBA8 298 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 C3orf58Q8NDZ4 430 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 PARD3BQ8TEW8 1205 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 TMEM169Q96HH4 297 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 PAAF1Q9BRP4 392 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 FAM213AQ9BRX8 229 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 HERC2P3Q9BVR0 1158 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 APOL6Q9BWW8 343 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 GPR62Q9BZJ7 368 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 CRISPLD1Q9H336 500 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 MFSD1Q9H3U5 465 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 SSX2IPQ9Y2D8 614 aa7.27□□□□□ -1.25
VPS52-219ENST00000493379 FNDC3AQ9Y2H6 1198 aaKnown RBP7.27□□□□□ -1.25
VPS52-219ENST00000493379 USP15Q9Y4E8 981 aaPredicted RBP7.27□□□□□ -1.25
VPS52-219ENST00000493379 TEX15Q9BXT5 2789 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms