RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 CEP135Q66GS9 1140 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 PHLDB3Q6NSJ2 640 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 FAM171BQ6P995 826 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 DPH6Q7L8W6 267 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 ARID3BQ8IVW6 561 aaPredicted RBP12.62□□□□□ -0.39
MDC1-207ENST00000492462 CCDC105Q8IYK2 499 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 DTWD2Q8NBA8 298 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 ENGASEQ8NFI3 743 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 SPATA18Q8TC71 538 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 ERCC4Q92889 916 aaPredicted RBP12.62□□□□□ -0.39
MDC1-207ENST00000492462 MYLPFQ96A32 169 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 DDX23Q9BUQ8 820 aaKnown RBP12.62□□□□□ -0.39
MDC1-207ENST00000492462 SMG9Q9H0W8 520 aaKnown RBP12.62□□□□□ -0.39
MDC1-207ENST00000492462 TRPV4Q9HBA0 871 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 HEBP1Q9NRV9 189 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 DLGAP2Q9P1A6 1054 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 ANAPC1Q9H1A4 1944 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 PHACTR2O75167 634 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 PRAMEF12O95522 483 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 PSMC3P17980 439 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 PCSK1P29120 753 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 RAP1GAPP47736 663 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 CDH8P55286 799 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 NLRP12P59046 1061 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 TRPC3Q13507 836 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 KCNB1Q14721 858 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 TAF12Q16514 161 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 TPRG1Q6ZUI0 275 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 DGLUCYQ7Z3D6 616 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 SPATA2LQ8IUW3 424 aaPredicted RBP12.61□□□□□ -0.39
MDC1-207ENST00000492462 SCN4BQ8IWT1 228 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 GUF1Q8N442 669 aaKnown RBP12.61□□□□□ -0.39
MDC1-207ENST00000492462 TMEM174Q8WUU8 243 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 CCDC47Q96A33 483 aaKnown RBP12.61□□□□□ -0.39
MDC1-207ENST00000492462 TRMT61BQ9BVS5 477 aaKnown RBP12.61□□□□□ -0.39
MDC1-207ENST00000492462 SLC46A2Q9BY10 475 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 GPR88Q9GZN0 384 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 SDCBP2Q9H190 292 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 DPEP3Q9H4B8 488 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 SMYD3Q9H7B4 428 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 BRD9Q9H8M2 597 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 ABCB6Q9NP58 842 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 NXF1Q9UBU9 619 aaKnown RBP12.61□□□□□ -0.39
MDC1-207ENST00000492462 MAGED2Q9UNF1 606 aaPredicted RBP12.61□□□□□ -0.39
MDC1-207ENST00000492462 TRAF3IP3Q9Y228 551 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 SIT1Q9Y3P8 196 aa12.61□□□□□ -0.39
MDC1-207ENST00000492462 KIF26AQ9ULI4 1882 aaPredicted RBP12.61□□□□□ -0.39
MDC1-207ENST00000492462 MAP1BP46821 2468 aaKnown RBP12.61□□□□□ -0.39
MDC1-207ENST00000492462 KANSL1LA0AUZ9 987 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 SLC38A8A6NNN8 435 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 TACC1O75410 805 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 TADA3O75528 432 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 AKAP3O75969 853 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 STAU1O95793 577 aaKnown RBP12.6□□□□□ -0.39
MDC1-207ENST00000492462 F11P03951 625 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 BDNFP23560 247 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 GNL1P36915 607 aaPredicted RBP12.6□□□□□ -0.39
MDC1-207ENST00000492462 NUBP1P53384 320 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 TNNC1P63316 161 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 PFKPQ01813 784 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 PRKCQQ04759 706 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 NCOA4Q13772 614 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 CFAP221Q4G0U5 840 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 ZCWPW2Q504Y3 356 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 MDH1BQ5I0G3 518 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 MFSD6LQ8IWD5 586 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 PJA1Q8NG27 643 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 OR6B3Q8NGW1 331 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 EEF2KMTQ96G04 330 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 PCED1BQ96HM7 432 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 ZFYVE19Q96K21 471 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 SNX25Q9H3E2 840 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 TASP1Q9H6P5 420 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.6□□□□□ -0.39
MDC1-207ENST00000492462 CDH9Q9ULB4 789 aa12.6□□□□□ -0.39
MDC1-207ENST00000492462 GOLGA6L4A6NEF3 574 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 ARNTLO00327 626 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 CALUO43852 315 aaPredicted RBP12.59□□□□□ -0.39
MDC1-207ENST00000492462 NOL4O94818 638 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 FGF19O95750 216 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 TRIM49P0CI25 452 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 TRIM49CP0CI26 452 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 NR2F2P24468 414 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 TARSP26639 723 aaKnown RBP12.59□□□□□ -0.39
MDC1-207ENST00000492462 CDC25CP30307 473 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 CACNA2D1P54289 1103 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 RPL10AP62906 217 aaKnown RBP12.59□□□□□ -0.39
MDC1-207ENST00000492462 CYP27A1Q02318 531 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 UBXN2BQ14CS0 331 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 ZNF699Q32M78 642 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 ZACNQ401N2 412 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 ARHGAP15Q53QZ3 475 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 TXNDC8Q6A555 127 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 SPOPLQ6IQ16 392 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 SCARA5Q6ZMJ2 495 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 SV2AQ7L0J3 742 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 MAB21L3Q8N8X9 362 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 MYCBPAPQ8TBZ2 947 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 TMC2Q8TDI7 906 aa12.59□□□□□ -0.39
MDC1-207ENST00000492462 DEPDC1BQ8WUY9 529 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms