RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 GFRA3O60609 400 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 OBSL1O75147 1896 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 TNNC2P02585 160 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 F11P03951 625 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 DLATP10515 647 aaKnown RBP13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 CASP4P49662 377 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 TSPY1Q01534 308 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 KCNB1Q14721 858 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 UBXN2BQ14CS0 331 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 DDR2Q16832 855 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 GPR158Q5T848 1215 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 FAM171BQ6P995 826 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 HS2ST1Q7LGA3 356 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 C1orf210Q8IVY1 113 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 SPATA18Q8TC71 538 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 FAM200AQ8TCP9 573 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 NUP210Q8TEM1 1887 aaPredicted RBP13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 CGRRF1Q99675 332 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 OSBPL6Q9BZF3 934 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 SMG9Q9H0W8 520 aaKnown RBP13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 XYLT2Q9H1B5 865 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 KCTD10Q9H3F6 313 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 CRTAC1Q9NQ79 661 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 KIAA1468Q9P260 1216 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 PRR23AA6NEV1 266 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 BIN1O00499 593 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 KIF20AO95235 890 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 LHX1P48742 406 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 NLRP12P59046 1061 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 PSMC1P62191 440 aaKnown RBP13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 CLDN10P78369 228 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 MYL7Q01449 175 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 VEPH1Q14D04 833 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 NFE2Q16621 373 aaPredicted RBP13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 WDR44Q5JSH3 913 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 ISM2Q6H9L7 571 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 DPH6Q7L8W6 267 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 RIN3Q8TB24 985 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 TMEM174Q8WUU8 243 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 DEPDC1BQ8WUY9 529 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 IRF7Q92985 503 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 ZFYVE19Q96K21 471 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 MRPL45Q9BRJ2 306 aaKnown RBP13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 GTPBP4Q9BZE4 634 aaKnown RBP13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 TASP1Q9H6P5 420 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 ABCB6Q9NP58 842 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 OTOGLQ3ZCN5 2332 aa13.59□□□□□ -0.23
SEC61A1-206ENST00000491668 FANCMQ8IYD8 2048 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 TADA3O75528 432 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 NOL4O94818 638 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 RHOBTB3O94955 611 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 FGF19O95750 216 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 SP9P0CG40 484 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 TNNI1P19237 187 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 WARSP23381 471 aaKnown RBP13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 WEE1P30291 646 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 SOX9P48436 509 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 MYL6P60660 151 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 MYO1EQ12965 1108 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 CFAP221Q4G0U5 840 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 ZNF852Q6ZMS4 543 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 ELMO3Q96BJ8 720 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 CGNQ9P2M7 1197 aaKnown RBP13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 CCL26Q9Y258 94 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 PIAS3Q9Y6X2 628 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 R4GN57 208 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 KIF26AQ9ULI4 1882 aaPredicted RBP13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 PTPRDP23468 1912 aa13.58□□□□□ -0.24
SEC61A1-206ENST00000491668 LRRIQ3A6PVS8 624 aaPredicted RBP13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 ZNF263O14978 683 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 CHADO15335 359 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 EXOC3O60645 756 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 PDGFRBP09619 1106 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 PCSK1P29120 753 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 CDC25CP30307 473 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 DLG4P78352 724 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 STIM1Q13586 685 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 C1orf220Q5T0J3 134 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 TDRD10Q5VZ19 366 aaKnown RBP13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 TXNDC8Q6A555 127 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 SASS6Q6UVJ0 657 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 SLC9A9Q8IVB4 645 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 PARD3BQ8TEW8 1205 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 MYLPFQ96A32 169 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 E2F7Q96AV8 911 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 MYRFLQ96LU7 910 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 FNBP1Q96RU3 617 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 SLC22A12Q96S37 553 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 NELL2Q99435 816 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 SYT15Q9BQS2 421 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 BCO2Q9BYV7 579 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 TMEM30AQ9NV96 361 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 MAN1B1Q9UKM7 699 aa13.57□□□□□ -0.24
SEC61A1-206ENST00000491668 GREB1Q4ZG55 1949 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 DCHS1Q96JQ0 3298 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 SLC38A8A6NNN8 435 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 PDXKO00764 312 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 TACC1O75410 805 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 LETM1O95202 739 aaPredicted RBP13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 VNN1O95497 513 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms