RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 SP9P0CG40 484 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 CSH1P0DML2 217 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 CSH2P0DML3 217 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 WARSP23381 471 aaKnown RBP11.08□□□□□ -0.64
RBM39-236ENST00000490484 AVPR1AP37288 418 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 SOX9P48436 509 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 KPNA1P52294 538 aaPredicted RBP11.08□□□□□ -0.64
RBM39-236ENST00000490484 CYP27A1Q02318 531 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 TRPC3Q13507 836 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 WDR72Q3MJ13 1102 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 C4orf50Q6ZRC1 276 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 DPH6Q7L8W6 267 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 MAML2Q8IZL2 1156 aaPredicted RBP11.08□□□□□ -0.64
RBM39-236ENST00000490484 MAB21L3Q8N8X9 362 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 TTC8Q8TAM2 541 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 PLEKHO2Q8TD55 490 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 BPIFB1Q8TDL5 484 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 ZNF516Q92618 1163 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 FUBP3Q96I24 572 aaKnown RBP eCLIP11.08□□□□□ -0.64
RBM39-236ENST00000490484 NELL2Q99435 816 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 SLC46A2Q9BY10 475 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 SCAND2PQ9GZW5 306 aaPredicted RBP11.08□□□□□ -0.64
RBM39-236ENST00000490484 GOLPH3LQ9H4A5 285 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 CRTAC1Q9NQ79 661 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 NXF1Q9UBU9 619 aaKnown RBP11.08□□□□□ -0.64
RBM39-236ENST00000490484 CDH9Q9ULB4 789 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 NME7Q9Y5B8 376 aa11.08□□□□□ -0.64
RBM39-236ENST00000490484 KIF26AQ9ULI4 1882 aaPredicted RBP11.08□□□□□ -0.64
RBM39-236ENST00000490484 CACNA1IQ9P0X4 2223 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 RIF1Q5UIP0 2472 aaKnown RBP11.07□□□□□ -0.64
RBM39-236ENST00000490484 FAM237AA0A1B0GTK4 181 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 LRRIQ3A6PVS8 624 aaPredicted RBP11.07□□□□□ -0.64
RBM39-236ENST00000490484 PHACTR2O75167 634 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 NOL4O94818 638 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 F11P03951 625 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 NR3C1P04150 777 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 CCNE1P24864 410 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 DDX6P26196 483 aaKnown RBP eCLIP11.07□□□□□ -0.64
RBM39-236ENST00000490484 MAGEA9P43362 315 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 MYL6P60660 151 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 TNK2Q07912 1038 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 PSMD2Q13200 908 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 ZNF699Q32M78 642 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 ARHGAP29Q52LW3 1261 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 MDH1BQ5I0G3 518 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 TDRD10Q5VZ19 366 aaKnown RBP11.07□□□□□ -0.64
RBM39-236ENST00000490484 CEP135Q66GS9 1140 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 TXNDC8Q6A555 127 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 FAM171BQ6P995 826 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 ZC3H14Q6PJT7 736 aaKnown RBP11.07□□□□□ -0.64
RBM39-236ENST00000490484 SCARA5Q6ZMJ2 495 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 LIMS2Q7Z4I7 341 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 CMTM8Q8IZV2 173 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 ZNF687Q8N1G0 1237 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 CELF5Q8N6W0 485 aaKnown RBP11.07□□□□□ -0.64
RBM39-236ENST00000490484 OR6B3Q8NGW1 331 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 MRPS31Q92665 395 aaKnown RBP11.07□□□□□ -0.64
RBM39-236ENST00000490484 CCDC47Q96A33 483 aaKnown RBP11.07□□□□□ -0.64
RBM39-236ENST00000490484 SYAP1Q96A49 352 aaPredicted RBP11.07□□□□□ -0.64
RBM39-236ENST00000490484 CLDN23Q96B33 292 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 PCED1BQ96HM7 432 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 SNX25Q9H3E2 840 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 KCTD10Q9H3F6 313 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 DPEP3Q9H4B8 488 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 SMYD3Q9H7B4 428 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 TRPC7Q9HCX4 862 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 OBP2AQ9NY56 170 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 GTSE1Q9NYZ3 720 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 UXTQ9UBK9 157 aaPredicted RBP11.07□□□□□ -0.64
RBM39-236ENST00000490484 CCL26Q9Y258 94 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 DENND4CQ5VZ89 1909 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 GVINP1Q7Z2Y8 2422 aa11.07□□□□□ -0.64
RBM39-236ENST00000490484 PTPRDP23468 1912 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 A0A1W2PQ27 194 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 A0A1W2PQ64 194 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 A0A1W2PQD8 194 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 SPECC1L-ADORA2AF8WAN1 911 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 TACC1O75410 805 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 BDNFP23560 247 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 ANXA13P27216 316 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 WEE1P30291 646 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 CTHP32929 405 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 GNL1P36915 607 aaPredicted RBP11.06□□□□□ -0.64
RBM39-236ENST00000490484 GRIK1P39086 918 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 MAGEA11P43364 429 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 RPS9P46781 194 aaKnown RBP11.06□□□□□ -0.64
RBM39-236ENST00000490484 RAP1GAPP47736 663 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 DLG4P78352 724 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 DPYDQ12882 1025 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 MTAPQ13126 283 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 FZD5Q13467 585 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 BECN1Q14457 450 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 MAPRE1Q15691 268 aaKnown RBP11.06□□□□□ -0.64
RBM39-236ENST00000490484 TSSK4Q6SA08 328 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 KRBA2Q6ZNG9 492 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 SLC9A9Q8IVB4 645 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 TTC16Q8NEE8 873 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 MYCBPAPQ8TBZ2 947 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 PARD3BQ8TEW8 1205 aa11.06□□□□□ -0.64
RBM39-236ENST00000490484 USP13Q92995 863 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms