RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.08■□□□□ 0.65
YIPF3-208ENST00000490447 SYT1P21579 422 aa19.08■□□□□ 0.65
YIPF3-208ENST00000490447 PDGFRLQ15198 375 aa19.08■□□□□ 0.65
YIPF3-208ENST00000490447 CSRP2Q16527 193 aa19.08■□□□□ 0.65
YIPF3-208ENST00000490447 TMEM196Q5HYL7 178 aa19.08■□□□□ 0.65
YIPF3-208ENST00000490447 CCDC65Q8IXS2 484 aa19.08■□□□□ 0.65
YIPF3-208ENST00000490447 GPD1LQ8N335 351 aa19.08■□□□□ 0.65
YIPF3-208ENST00000490447 FSIP1Q8NA03 581 aa19.08■□□□□ 0.65
YIPF3-208ENST00000490447 TRMT2BQ96GJ1 504 aaKnown RBP19.08■□□□□ 0.65
YIPF3-208ENST00000490447 PDE11AQ9HCR9 933 aa19.08■□□□□ 0.65
YIPF3-208ENST00000490447 GDAP2Q9NXN4 497 aa19.08■□□□□ 0.65
YIPF3-208ENST00000490447 FRMD3A2A2Y4 597 aa19.07■□□□□ 0.64
YIPF3-208ENST00000490447 TRDMT1O14717 391 aaKnown RBP19.07■□□□□ 0.64
YIPF3-208ENST00000490447 KIAA0391O15091 583 aaKnown RBP19.07■□□□□ 0.64
YIPF3-208ENST00000490447 NOL4O94818 638 aa19.07■□□□□ 0.64
YIPF3-208ENST00000490447 CKMP06732 381 aa19.07■□□□□ 0.64
YIPF3-208ENST00000490447 CCDC192P0DO97 292 aa19.07■□□□□ 0.64
YIPF3-208ENST00000490447 FAM160A1Q05DH4 1040 aa19.07■□□□□ 0.64
YIPF3-208ENST00000490447 ZNF268Q14587 947 aaPredicted RBP19.07■□□□□ 0.64
YIPF3-208ENST00000490447 CFAP221Q4G0U5 840 aa19.07■□□□□ 0.64
YIPF3-208ENST00000490447 SCN4BQ8IWT1 228 aa19.07■□□□□ 0.64
YIPF3-208ENST00000490447 CPA6Q8N4T0 437 aa19.07■□□□□ 0.64
YIPF3-208ENST00000490447 FAM160A2Q8N612 972 aaPredicted RBP19.07■□□□□ 0.64
YIPF3-208ENST00000490447 FUBP3Q96I24 572 aaKnown RBP eCLIP19.07■□□□□ 0.64
YIPF3-208ENST00000490447 TRAV19A0A0A6YYK7 116 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 SLC30A4O14863 429 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 PRPF6O94906 941 aaKnown RBP19.06■□□□□ 0.64
YIPF3-208ENST00000490447 TNNC2P02585 160 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 USP17L7P0C7H9 530 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 ARSAP15289 507 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 DRD1P21728 446 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 MTF1Q14872 753 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 SURF1Q15526 300 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 LMBRD2Q68DH5 695 aaPredicted RBP19.06■□□□□ 0.64
YIPF3-208ENST00000490447 FSTL4Q6MZW2 842 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 C4orf50Q6ZRC1 276 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 PDILTQ8N807 584 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 MYRFLQ96LU7 910 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 LRRC27Q9C0I9 530 aa19.06■□□□□ 0.64
YIPF3-208ENST00000490447 CCDC163A0A0D9SF12 145 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 OTOL1A6NHN0 477 aaPredicted RBP19.05■□□□□ 0.64
YIPF3-208ENST00000490447 RNF40O75150 1001 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 TADA3O75528 432 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 RPP40O75818 363 aaKnown RBP19.05■□□□□ 0.64
YIPF3-208ENST00000490447 IFNAR2P48551 515 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 PXNP49023 591 aaPredicted RBP19.05■□□□□ 0.64
YIPF3-208ENST00000490447 SLC39A14Q15043 492 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 PKN3Q6P5Z2 889 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 DPH6Q7L8W6 267 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 CACNA2D4Q7Z3S7 1137 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 OSTM1Q86WC4 334 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 CXorf38Q8TB03 319 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 GAB3Q8WWW8 586 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 FAM84AQ96KN4 292 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 USP28Q96RU2 1077 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 PKMYT1Q99640 499 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 P2RY13Q9BPV8 354 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 FGFBP2Q9BYJ0 223 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 ZSCAN16Q9H4T2 348 aaPredicted RBP19.05■□□□□ 0.64
YIPF3-208ENST00000490447 DUS2Q9NX74 493 aaKnown RBP19.05■□□□□ 0.64
YIPF3-208ENST00000490447 SIX4Q9UIU6 781 aa19.05■□□□□ 0.64
YIPF3-208ENST00000490447 MORC2Q9Y6X9 1032 aaPredicted RBP19.05■□□□□ 0.64
YIPF3-208ENST00000490447 ZNF233A6NK53 670 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 GABRDO14764 452 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 EGFP01133 1207 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 PDE6CP51160 858 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 KCNB1Q14721 858 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 STK38Q15208 465 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 MAPRE1Q15691 268 aaKnown RBP19.04■□□□□ 0.64
YIPF3-208ENST00000490447 SOWAHAQ2M3V2 549 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 FBXO43Q4G163 708 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 AASDHQ4L235 1098 aaPredicted RBP19.04■□□□□ 0.64
YIPF3-208ENST00000490447 CAMKK1Q8N5S9 505 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 C12orf50Q8NA57 414 aaPredicted RBP19.04■□□□□ 0.64
YIPF3-208ENST00000490447 OSCP1Q8WVF1 389 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 ATP2A3Q93084 1043 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 HPDLQ96IR7 371 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 SYT15Q9BQS2 421 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 TNMDQ9H2S6 317 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 ECT2Q9H8V3 914 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 INTS13Q9NVM9 706 aa19.04■□□□□ 0.64
YIPF3-208ENST00000490447 MAGEC2Q9UBF1 373 aaPredicted RBP19.04■□□□□ 0.64
YIPF3-208ENST00000490447 KIF26AQ9ULI4 1882 aaPredicted RBP19.03■□□□□ 0.64
YIPF3-208ENST00000490447 A0A087X0B3 334 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 AXIN1O15169 862 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 HCRTO43612 131 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 HOXC13P31276 330 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 GJA4P35212 333 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 GALK1P51570 392 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 NR1H3Q13133 447 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 ZNF77Q15935 545 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 CCDC142Q17RM4 750 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 DUOXA2Q1HG44 320 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 PPM1JQ5JR12 505 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 RIN3Q8TB24 985 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 CHFRQ96EP1 664 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 INTS4Q96HW7 963 aaKnown RBP19.03■□□□□ 0.64
YIPF3-208ENST00000490447 LOXL4Q96JB6 756 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 CNTNAP3BQ96NU0 1288 aa19.03■□□□□ 0.64
YIPF3-208ENST00000490447 CYP2S1Q96SQ9 504 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms